Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC083899.2-201ENST00000423285 1376 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AL360270.2-201ENST00000562952 5985 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC114774.1-201ENST00000507410 1770 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC022325.1-201ENST00000502748 2199 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC235565.1-201ENST00000456962 1325 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AL592494.2-201ENST00000425455 1548 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 TMSB4XP2-201ENST00000335179 210 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 OR10R3P-201ENST00000361688 942 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AL353692.2-201ENST00000407054 335 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AL096829.1-201ENST00000413677 457 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC130360.1-201ENST00000425489 1117 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 CRIP1P1-201ENST00000427567 185 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 ZNF965P-201ENST00000432501 817 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AL606490.7-201ENST00000433136 191 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC023141.3-201ENST00000436698 278 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 TRIM60P16-201ENST00000444048 694 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC016027.4-201ENST00000450866 277 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 MTND2P6-201ENST00000455337 1030 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 CABYRP1-201ENST00000465493 1045 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 snoU109.6-201ENST00000516831 118 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC130365.2-201ENST00000525882 1201 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 CR383656.6-201ENST00000550518 394 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 CR383656.14-201ENST00000551951 406 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC106785.3-201ENST00000564064 847 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 MIR4697-201ENST00000582977 78 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 PPATP2-201ENST00000605635 508 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AL133481.2-203ENST00000607558 139 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC022106.1-201ENST00000612834 766 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC096708.4-201ENST00000620563 552 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AL391262.2-201ENST00000622466 494 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 AC008079.2-201ENST00000623543 20396 ntBASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDLIM3Q53GG5 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC132825.1-201ENST00000463573 2247 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 UGT2B26P-201ENST00000508672 1613 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms