Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.46□□□□□ -1.86
PRKDCP78527 AC236972.1-201ENST00000433225 199 ntBASIC3.46□□□□□ -1.86
PRKDCP78527 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.46□□□□□ -1.86
PRKDCP78527 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.46□□□□□ -1.86
PRKDCP78527 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.46□□□□□ -1.86
PRKDCP78527 AC053481.1-201ENST00000467217 306 ntBASIC3.46□□□□□ -1.86
PRKDCP78527 RN7SKP13-201ENST00000515933 244 ntBASIC3.46□□□□□ -1.86
PRKDCP78527 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.46□□□□□ -1.86
PRKDCP78527 OR6C71P-202ENST00000641886 1107 ntBASIC3.46□□□□□ -1.86
PRKDCP78527 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRKDCP78527 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PRKDCP78527 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.46□□□□□ -1.86
PRKDCP78527 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PRKDCP78527 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRKDCP78527 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
PRKDCP78527 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
PRKDCP78527 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRKDCP78527 AL117378.2-201ENST00000622916 1337 ntBASIC3.46□□□□□ -1.86
PRKDCP78527 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PRKDCP78527 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRKDCP78527 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRKDCP78527 RNA5SP366-201ENST00000365454 123 ntBASIC3.46□□□□□ -1.86
PRKDCP78527 Z92545.1-201ENST00000411782 234 ntBASIC3.46□□□□□ -1.86
PRKDCP78527 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.46□□□□□ -1.86
PRKDCP78527 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.46□□□□□ -1.86
PRKDCP78527 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.46□□□□□ -1.86
PRKDCP78527 MIR6867-201ENST00000610636 67 ntBASIC3.46□□□□□ -1.86
PRKDCP78527 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.46□□□□□ -1.86
PRKDCP78527 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRKDCP78527 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
PRKDCP78527 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRKDCP78527 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.45□□□□□ -1.86
PRKDCP78527 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRKDCP78527 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRKDCP78527 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRKDCP78527 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRKDCP78527 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRKDCP78527 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRKDCP78527 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC3.45□□□□□ -1.86
PRKDCP78527 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRKDCP78527 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.45□□□□□ -1.86
PRKDCP78527 AC007389.2-201ENST00000434630 306 ntBASIC3.45□□□□□ -1.86
PRKDCP78527 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRKDCP78527 AC023632.4-201ENST00000517783 191 ntBASIC3.45□□□□□ -1.86
PRKDCP78527 AC026403.1-201ENST00000518938 295 ntBASIC3.45□□□□□ -1.86
PRKDCP78527 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC3.45□□□□□ -1.86
PRKDCP78527 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.45□□□□□ -1.86
PRKDCP78527 MIR5699-201ENST00000578903 90 ntBASIC3.45□□□□□ -1.86
PRKDCP78527 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.45□□□□□ -1.86
PRKDCP78527 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRKDCP78527 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRKDCP78527 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC3.45□□□□□ -1.86
PRKDCP78527 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRKDCP78527 UTY-203ENST00000362096 4990 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRKDCP78527 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.45□□□□□ -1.86
PRKDCP78527 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRKDCP78527 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC3.45□□□□□ -1.86
PRKDCP78527 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRKDCP78527 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
PRKDCP78527 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.45□□□□□ -1.86
PRKDCP78527 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC3.45□□□□□ -1.86
PRKDCP78527 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
PRKDCP78527 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
PRKDCP78527 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRKDCP78527 snoU13.29-201ENST00000459370 104 ntBASIC3.45□□□□□ -1.86
PRKDCP78527 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.45□□□□□ -1.86
PRKDCP78527 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PRKDCP78527 AC004836.1-201ENST00000623032 634 ntBASIC3.45□□□□□ -1.86
PRKDCP78527 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRKDCP78527 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PRKDCP78527 MAP1A-202ENST00000382031 10553 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
PRKDCP78527 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC3.45□□□□□ -1.86
PRKDCP78527 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC3.45□□□□□ -1.86
PRKDCP78527 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRKDCP78527 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC3.45□□□□□ -1.86
PRKDCP78527 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
PRKDCP78527 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.45□□□□□ -1.86
PRKDCP78527 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRKDCP78527 FTH1P16-201ENST00000435241 552 ntBASIC3.45□□□□□ -1.86
PRKDCP78527 AC079804.1-201ENST00000461922 436 ntBASIC3.45□□□□□ -1.86
PRKDCP78527 RN7SL810P-201ENST00000493031 276 ntBASIC3.45□□□□□ -1.86
PRKDCP78527 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.45□□□□□ -1.86
PRKDCP78527 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.45□□□□□ -1.86
PRKDCP78527 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC3.45□□□□□ -1.86
PRKDCP78527 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.45□□□□□ -1.86
PRKDCP78527 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC3.45□□□□□ -1.86
PRKDCP78527 UGP2-232ENST00000640075 567 ntTSL 5 BASIC3.45□□□□□ -1.86
PRKDCP78527 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.45□□□□□ -1.86
PRKDCP78527 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRKDCP78527 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PRKDCP78527 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
PRKDCP78527 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRKDCP78527 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
PRKDCP78527 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
PRKDCP78527 AC120036.2-201ENST00000509729 1474 ntBASIC3.44□□□□□ -1.86
PRKDCP78527 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PRKDCP78527 AP000756.2-201ENST00000624168 2567 ntBASIC3.44□□□□□ -1.86
PRKDCP78527 AC097374.1-203ENST00000400783 485 ntBASIC3.44□□□□□ -1.86
PRKDCP78527 RPS27AP11-201ENST00000402798 447 ntBASIC3.44□□□□□ -1.86
PRKDCP78527 COX6CP15-201ENST00000426313 211 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms