Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.42□□□□□ -1.7
LMO4P61968 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 AC005252.1-201ENST00000604518 1063 ntBASIC4.42□□□□□ -1.7
LMO4P61968 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.42□□□□□ -1.7
LMO4P61968 AC018645.2-201ENST00000609151 472 ntBASIC4.42□□□□□ -1.7
LMO4P61968 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.42□□□□□ -1.7
LMO4P61968 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
LMO4P61968 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.42□□□□□ -1.7
LMO4P61968 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.42□□□□□ -1.7
LMO4P61968 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
LMO4P61968 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
LMO4P61968 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC4.42□□□□□ -1.7
LMO4P61968 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC4.42□□□□□ -1.7
LMO4P61968 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LMO4P61968 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LMO4P61968 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LMO4P61968 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
LMO4P61968 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.41□□□□□ -1.7
LMO4P61968 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.41□□□□□ -1.7
LMO4P61968 OR51C1P-202ENST00000641159 1444 ntBASIC4.41□□□□□ -1.7
LMO4P61968 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LMO4P61968 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.41□□□□□ -1.7
LMO4P61968 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LMO4P61968 RNU1-146P-201ENST00000364015 165 ntBASIC4.41□□□□□ -1.7
LMO4P61968 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LMO4P61968 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LMO4P61968 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.41□□□□□ -1.7
LMO4P61968 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.41□□□□□ -1.7
LMO4P61968 SNORD56.6-201ENST00000384569 71 ntBASIC4.41□□□□□ -1.7
LMO4P61968 RNU6-883P-201ENST00000384597 107 ntBASIC4.41□□□□□ -1.7
LMO4P61968 MIR550A3-201ENST00000390735 95 ntBASIC4.41□□□□□ -1.7
LMO4P61968 AL645733.1-201ENST00000402250 217 ntBASIC4.41□□□□□ -1.7
LMO4P61968 AL589647.1-201ENST00000402485 466 ntBASIC4.41□□□□□ -1.7
LMO4P61968 AL133270.1-201ENST00000402635 279 ntBASIC4.41□□□□□ -1.7
LMO4P61968 RN7SKP126-201ENST00000411143 300 ntBASIC4.41□□□□□ -1.7
LMO4P61968 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.41□□□□□ -1.7
LMO4P61968 AC211486.3-201ENST00000412694 621 ntBASIC4.41□□□□□ -1.7
LMO4P61968 AC093162.1-201ENST00000419682 124 ntBASIC4.41□□□□□ -1.7
LMO4P61968 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.41□□□□□ -1.7
LMO4P61968 AL590762.4-201ENST00000425885 253 ntBASIC4.41□□□□□ -1.7
LMO4P61968 AL590623.1-201ENST00000427864 105 ntBASIC4.41□□□□□ -1.7
LMO4P61968 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.41□□□□□ -1.7
LMO4P61968 MTND2P2-201ENST00000434633 945 ntBASIC4.41□□□□□ -1.7
LMO4P61968 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.41□□□□□ -1.7
LMO4P61968 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.41□□□□□ -1.7
LMO4P61968 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.41□□□□□ -1.7
LMO4P61968 AL606517.1-201ENST00000446914 387 ntBASIC4.41□□□□□ -1.7
LMO4P61968 AL645937.3-201ENST00000453647 936 ntBASIC4.41□□□□□ -1.7
LMO4P61968 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.41□□□□□ -1.7
LMO4P61968 AC105918.1-201ENST00000474399 838 ntBASIC4.41□□□□□ -1.7
LMO4P61968 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.41□□□□□ -1.7
LMO4P61968 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.41□□□□□ -1.7
LMO4P61968 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.41□□□□□ -1.7
LMO4P61968 AC091912.1-201ENST00000511351 248 ntBASIC4.41□□□□□ -1.7
LMO4P61968 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.41□□□□□ -1.7
LMO4P61968 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.41□□□□□ -1.7
LMO4P61968 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.41□□□□□ -1.7
LMO4P61968 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.41□□□□□ -1.7
LMO4P61968 AP001372.4-201ENST00000524889 472 ntBASIC4.41□□□□□ -1.7
LMO4P61968 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.41□□□□□ -1.7
LMO4P61968 OR8G3P-201ENST00000533406 921 ntBASIC4.41□□□□□ -1.7
LMO4P61968 AC134349.2-201ENST00000535136 910 ntBASIC4.41□□□□□ -1.7
LMO4P61968 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.41□□□□□ -1.7
LMO4P61968 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.41□□□□□ -1.7
LMO4P61968 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.41□□□□□ -1.7
LMO4P61968 AC027281.1-201ENST00000574178 758 ntBASIC4.41□□□□□ -1.7
LMO4P61968 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.41□□□□□ -1.7
LMO4P61968 AC011447.4-201ENST00000587562 111 ntBASIC4.41□□□□□ -1.7
LMO4P61968 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.41□□□□□ -1.7
LMO4P61968 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.41□□□□□ -1.7
LMO4P61968 AC096947.1-201ENST00000603233 470 ntBASIC4.41□□□□□ -1.7
LMO4P61968 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.41□□□□□ -1.7
LMO4P61968 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.41□□□□□ -1.7
LMO4P61968 AL451064.1-201ENST00000607718 471 ntBASIC4.41□□□□□ -1.7
LMO4P61968 AC135803.1-201ENST00000608748 565 ntBASIC4.41□□□□□ -1.7
LMO4P61968 AC015712.7-201ENST00000615211 635 ntBASIC4.41□□□□□ -1.7
LMO4P61968 AL162233.1-201ENST00000620014 944 ntBASIC4.41□□□□□ -1.7
LMO4P61968 AC099494.2-201ENST00000623371 978 ntBASIC4.41□□□□□ -1.7
LMO4P61968 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.41□□□□□ -1.7
LMO4P61968 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LMO4P61968 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC4.41□□□□□ -1.7
LMO4P61968 BCORP1-203ENST00000513194 5093 ntBASIC4.41□□□□□ -1.7
LMO4P61968 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
LMO4P61968 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
LMO4P61968 AC131971.1-201ENST00000332881 1482 ntBASIC4.41□□□□□ -1.7
LMO4P61968 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.41□□□□□ -1.7
LMO4P61968 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
LMO4P61968 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.41□□□□□ -1.7
LMO4P61968 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LMO4P61968 AC083899.1-201ENST00000454465 3819 ntBASIC4.41□□□□□ -1.7
LMO4P61968 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LMO4P61968 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LMO4P61968 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms