Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.52□□□□□ -1.69
ACTBP60709 RNA5SP394-201ENST00000364216 119 ntBASIC4.52□□□□□ -1.69
ACTBP60709 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ACTBP60709 MIR589-201ENST00000385238 99 ntBASIC4.52□□□□□ -1.69
ACTBP60709 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.52□□□□□ -1.69
ACTBP60709 RN7SKP125-201ENST00000410481 302 ntBASIC4.52□□□□□ -1.69
ACTBP60709 IPPKP1-201ENST00000422501 768 ntBASIC4.52□□□□□ -1.69
ACTBP60709 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.52□□□□□ -1.69
ACTBP60709 AL389925.1-201ENST00000432257 728 ntBASIC4.52□□□□□ -1.69
ACTBP60709 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.52□□□□□ -1.69
ACTBP60709 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.52□□□□□ -1.69
ACTBP60709 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.52□□□□□ -1.69
ACTBP60709 AL672138.1-201ENST00000450604 1015 ntBASIC4.52□□□□□ -1.69
ACTBP60709 AL645937.3-201ENST00000453647 936 ntBASIC4.52□□□□□ -1.69
ACTBP60709 AC073358.1-201ENST00000505671 684 ntBASIC4.52□□□□□ -1.69
ACTBP60709 AC109481.1-201ENST00000509173 282 ntBASIC4.52□□□□□ -1.69
ACTBP60709 CYCSP22-201ENST00000517555 339 ntBASIC4.52□□□□□ -1.69
ACTBP60709 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.52□□□□□ -1.69
ACTBP60709 MRPS16P1-201ENST00000523462 412 ntBASIC4.52□□□□□ -1.69
ACTBP60709 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.52□□□□□ -1.69
ACTBP60709 PDCD5P1-201ENST00000543528 309 ntBASIC4.52□□□□□ -1.69
ACTBP60709 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.52□□□□□ -1.69
ACTBP60709 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.52□□□□□ -1.69
ACTBP60709 DPPA2P4-201ENST00000563717 878 ntBASIC4.52□□□□□ -1.69
ACTBP60709 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.52□□□□□ -1.69
ACTBP60709 SNORD39.2-201ENST00000579995 76 ntBASIC4.52□□□□□ -1.69
ACTBP60709 AL159169.2-201ENST00000610061 1269 ntBASIC4.52□□□□□ -1.69
ACTBP60709 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.52□□□□□ -1.69
ACTBP60709 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.52□□□□□ -1.69
ACTBP60709 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.52□□□□□ -1.69
ACTBP60709 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.52□□□□□ -1.69
ACTBP60709 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
ACTBP60709 SAMMSON-209ENST00000641222 1100 ntBASIC4.52□□□□□ -1.69
ACTBP60709 MIR193BHG-214ENST00000641765 509 ntBASIC4.52□□□□□ -1.69
ACTBP60709 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.52□□□□□ -1.69
ACTBP60709 AL592182.3-201ENST00000642132 3304 ntBASIC4.52□□□□□ -1.69
ACTBP60709 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
ACTBP60709 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.52□□□□□ -1.69
ACTBP60709 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ACTBP60709 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
ACTBP60709 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.52□□□□□ -1.69
ACTBP60709 LINC01109-201ENST00000603837 3081 ntBASIC4.52□□□□□ -1.69
ACTBP60709 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ACTBP60709 AC120338.1-201ENST00000625074 1541 ntBASIC4.51□□□□□ -1.69
ACTBP60709 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ACTBP60709 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ACTBP60709 AC063976.2-201ENST00000425667 3556 ntBASIC4.51□□□□□ -1.69
ACTBP60709 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ACTBP60709 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.51□□□□□ -1.69
ACTBP60709 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ACTBP60709 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.51□□□□□ -1.69
ACTBP60709 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ACTBP60709 RNA5SP510-201ENST00000364697 99 ntBASIC4.51□□□□□ -1.69
ACTBP60709 RN7SKP6-201ENST00000364795 319 ntBASIC4.51□□□□□ -1.69
ACTBP60709 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.51□□□□□ -1.69
ACTBP60709 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ACTBP60709 AC005522.1-201ENST00000395416 346 ntBASIC4.51□□□□□ -1.69
ACTBP60709 AC013442.1-201ENST00000397347 228 ntBASIC4.51□□□□□ -1.69
ACTBP60709 OR2AT2P-201ENST00000413438 905 ntBASIC4.51□□□□□ -1.69
ACTBP60709 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.51□□□□□ -1.69
ACTBP60709 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.51□□□□□ -1.69
ACTBP60709 AL590609.2-201ENST00000421430 368 ntBASIC4.51□□□□□ -1.69
ACTBP60709 RPL36AP10-201ENST00000421785 322 ntBASIC4.51□□□□□ -1.69
ACTBP60709 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.51□□□□□ -1.69
ACTBP60709 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.51□□□□□ -1.69
ACTBP60709 LRRC37A14P-201ENST00000452297 462 ntBASIC4.51□□□□□ -1.69
ACTBP60709 AC084754.1-201ENST00000463466 464 ntBASIC4.51□□□□□ -1.69
ACTBP60709 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.51□□□□□ -1.69
ACTBP60709 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ACTBP60709 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.51□□□□□ -1.69
ACTBP60709 RNA5SP303-201ENST00000516192 130 ntBASIC4.51□□□□□ -1.69
ACTBP60709 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.51□□□□□ -1.69
ACTBP60709 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.51□□□□□ -1.69
ACTBP60709 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.51□□□□□ -1.69
ACTBP60709 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.51□□□□□ -1.69
ACTBP60709 AC009597.2-201ENST00000604659 592 ntBASIC4.51□□□□□ -1.69
ACTBP60709 AC023813.4-201ENST00000607580 580 ntBASIC4.51□□□□□ -1.69
ACTBP60709 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.51□□□□□ -1.69
ACTBP60709 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ACTBP60709 AC022106.2-201ENST00000620114 757 ntBASIC4.51□□□□□ -1.69
ACTBP60709 AC015871.5-202ENST00000623252 701 ntBASIC4.51□□□□□ -1.69
ACTBP60709 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.51□□□□□ -1.69
ACTBP60709 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.51□□□□□ -1.69
ACTBP60709 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.51□□□□□ -1.69
ACTBP60709 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ACTBP60709 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ACTBP60709 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.51□□□□□ -1.69
ACTBP60709 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
ACTBP60709 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ACTBP60709 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ACTBP60709 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ACTBP60709 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.51□□□□□ -1.69
ACTBP60709 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
ACTBP60709 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.51□□□□□ -1.69
ACTBP60709 AC139713.2-215ENST00000641428 5037 ntBASIC4.51□□□□□ -1.69
ACTBP60709 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ACTBP60709 SRRM1P3-201ENST00000426911 2678 ntBASIC4.5□□□□□ -1.69
ACTBP60709 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
ACTBP60709 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
ACTBP60709 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms