Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH13P55290 AC093716.1-201ENST00000435923 377 ntBASIC5.24□□□□□ -1.57
CDH13P55290 AC074367.1-201ENST00000438685 1125 ntBASIC5.24□□□□□ -1.57
CDH13P55290 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH13P55290 HMGN1P2-201ENST00000445197 310 ntBASIC5.24□□□□□ -1.57
CDH13P55290 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH13P55290 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH13P55290 CABYRP1-201ENST00000465493 1045 ntBASIC5.24□□□□□ -1.57
CDH13P55290 AP000797.2-201ENST00000475768 606 ntBASIC5.24□□□□□ -1.57
CDH13P55290 RPS12P31-201ENST00000491419 398 ntBASIC5.24□□□□□ -1.57
CDH13P55290 RPL15P21-201ENST00000495592 567 ntBASIC5.24□□□□□ -1.57
CDH13P55290 ENPP7P11-201ENST00000505915 627 ntBASIC5.24□□□□□ -1.57
CDH13P55290 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH13P55290 HMGB1P46-201ENST00000520062 610 ntBASIC5.24□□□□□ -1.57
CDH13P55290 AC109635.6-201ENST00000525487 1113 ntBASIC5.24□□□□□ -1.57
CDH13P55290 AC027369.5-201ENST00000533838 755 ntBASIC5.24□□□□□ -1.57
CDH13P55290 AC134349.2-201ENST00000535136 910 ntBASIC5.24□□□□□ -1.57
CDH13P55290 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH13P55290 AL049872.1-201ENST00000556323 322 ntBASIC5.24□□□□□ -1.57
CDH13P55290 AC027176.2-201ENST00000559166 746 ntBASIC5.24□□□□□ -1.57
CDH13P55290 NMNAT1P5-201ENST00000559657 841 ntBASIC5.24□□□□□ -1.57
CDH13P55290 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH13P55290 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.24□□□□□ -1.57
CDH13P55290 MTCO3P22-201ENST00000603219 784 ntBASIC5.24□□□□□ -1.57
CDH13P55290 AC009027.1-201ENST00000604510 479 ntBASIC5.24□□□□□ -1.57
CDH13P55290 AL451049.1-201ENST00000608672 497 ntBASIC5.24□□□□□ -1.57
CDH13P55290 AL096803.3-201ENST00000609032 532 ntBASIC5.24□□□□□ -1.57
CDH13P55290 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH13P55290 AC025016.1-201ENST00000616746 682 ntBASIC5.24□□□□□ -1.57
CDH13P55290 AL359742.1-201ENST00000622497 540 ntBASIC5.24□□□□□ -1.57
CDH13P55290 AP003400.3-201ENST00000624904 346 ntBASIC5.24□□□□□ -1.57
CDH13P55290 OR5AC4P-202ENST00000642086 985 ntBASIC5.24□□□□□ -1.57
CDH13P55290 HSPA8P14-201ENST00000552265 1805 ntBASIC5.24□□□□□ -1.57
CDH13P55290 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH13P55290 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH13P55290 ADAM5-202ENST00000399789 1942 ntBASIC5.24□□□□□ -1.57
CDH13P55290 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH13P55290 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH13P55290 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH13P55290 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CDH13P55290 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH13P55290 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH13P55290 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH13P55290 AL121950.1-201ENST00000624993 2077 ntBASIC5.24□□□□□ -1.57
CDH13P55290 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH13P55290 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH13P55290 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH13P55290 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH13P55290 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CDH13P55290 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
CDH13P55290 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH13P55290 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH13P55290 RNU1-19P-201ENST00000363306 165 ntBASIC5.23□□□□□ -1.57
CDH13P55290 RNU4-2-201ENST00000365668 141 ntBASIC5.23□□□□□ -1.57
CDH13P55290 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH13P55290 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH13P55290 MT-TP-201ENST00000387461 68 ntBASIC5.23□□□□□ -1.57
CDH13P55290 RPL26P37-201ENST00000411983 438 ntBASIC5.23□□□□□ -1.57
CDH13P55290 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH13P55290 RPL12P9-201ENST00000412942 488 ntBASIC5.23□□□□□ -1.57
CDH13P55290 AL596448.1-201ENST00000415024 392 ntBASIC5.23□□□□□ -1.57
CDH13P55290 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.23□□□□□ -1.57
CDH13P55290 AL357078.2-201ENST00000416486 427 ntBASIC5.23□□□□□ -1.57
CDH13P55290 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH13P55290 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH13P55290 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH13P55290 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH13P55290 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH13P55290 PA2G4P6-201ENST00000438325 1197 ntBASIC5.23□□□□□ -1.57
CDH13P55290 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH13P55290 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.23□□□□□ -1.57
CDH13P55290 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH13P55290 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH13P55290 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.23□□□□□ -1.57
CDH13P55290 RPL5P13-201ENST00000462840 709 ntBASIC5.23□□□□□ -1.57
CDH13P55290 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.23□□□□□ -1.57
CDH13P55290 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH13P55290 AC138866.2-201ENST00000508650 584 ntBASIC5.23□□□□□ -1.57
CDH13P55290 AC016559.2-201ENST00000510759 359 ntBASIC5.23□□□□□ -1.57
CDH13P55290 AC098976.1-201ENST00000513014 541 ntBASIC5.23□□□□□ -1.57
CDH13P55290 RN7SKP70-201ENST00000516655 271 ntBASIC5.23□□□□□ -1.57
CDH13P55290 RN7SKP99-201ENST00000517028 307 ntBASIC5.23□□□□□ -1.57
CDH13P55290 MTCYBP19-201ENST00000517463 1124 ntBASIC5.23□□□□□ -1.57
CDH13P55290 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH13P55290 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH13P55290 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH13P55290 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CDH13P55290 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH13P55290 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH13P55290 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH13P55290 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH13P55290 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH13P55290 AC068020.1-201ENST00000594215 661 ntBASIC5.23□□□□□ -1.57
CDH13P55290 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH13P55290 AC027243.2-201ENST00000602530 724 ntBASIC5.23□□□□□ -1.57
CDH13P55290 AC130352.1-201ENST00000602979 661 ntBASIC5.23□□□□□ -1.57
CDH13P55290 AL135786.2-201ENST00000608422 615 ntBASIC5.23□□□□□ -1.57
CDH13P55290 Z95327.3-201ENST00000610385 572 ntBASIC5.23□□□□□ -1.57
CDH13P55290 AC091932.2-201ENST00000623014 291 ntBASIC5.23□□□□□ -1.57
CDH13P55290 AC132068.1-201ENST00000623805 459 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms