Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC093775.1-201ENST00000624154 1868 ntBASIC5.38□□□□□ -1.55
CLCNKAP51800 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.38□□□□□ -1.55
CLCNKAP51800 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.38□□□□□ -1.55
CLCNKAP51800 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLCNKAP51800 RARSP1-201ENST00000542842 1418 ntBASIC5.38□□□□□ -1.55
CLCNKAP51800 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.38□□□□□ -1.55
CLCNKAP51800 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CLCNKAP51800 AC093849.1-201ENST00000563631 2209 ntBASIC5.38□□□□□ -1.55
CLCNKAP51800 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLCNKAP51800 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.37□□□□□ -1.55
CLCNKAP51800 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLCNKAP51800 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.37□□□□□ -1.55
CLCNKAP51800 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CLCNKAP51800 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLCNKAP51800 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CLCNKAP51800 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLCNKAP51800 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CLCNKAP51800 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLCNKAP51800 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLCNKAP51800 RNA5SP335-201ENST00000363817 110 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CLCNKAP51800 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.37□□□□□ -1.55
CLCNKAP51800 AL356057.1-202ENST00000402263 756 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.37□□□□□ -1.55
CLCNKAP51800 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.37□□□□□ -1.55
CLCNKAP51800 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.37□□□□□ -1.55
CLCNKAP51800 MTND2P15-201ENST00000418575 892 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLCNKAP51800 MTCO1P45-201ENST00000431457 267 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 HMGB3P10-201ENST00000434734 572 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.37□□□□□ -1.55
CLCNKAP51800 RPL5P25-201ENST00000441148 775 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 AL158053.1-201ENST00000441503 453 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 LINC02210-201ENST00000444561 288 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 AL163193.1-201ENST00000444895 788 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 GXYLT1P1-201ENST00000446657 490 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.37□□□□□ -1.55
CLCNKAP51800 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.37□□□□□ -1.55
CLCNKAP51800 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.37□□□□□ -1.55
CLCNKAP51800 RBMY2TP-201ENST00000451162 947 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.37□□□□□ -1.55
CLCNKAP51800 RPL7P39-201ENST00000481157 744 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 AC108157.1-201ENST00000510511 539 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLCNKAP51800 AC020937.1-201ENST00000519677 1013 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
CLCNKAP51800 OR4V1P-201ENST00000525394 1140 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.37□□□□□ -1.55
CLCNKAP51800 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.37□□□□□ -1.55
CLCNKAP51800 AC122134.1-201ENST00000565664 1104 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLCNKAP51800 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.37□□□□□ -1.55
CLCNKAP51800 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.37□□□□□ -1.55
CLCNKAP51800 HMGB1P51-201ENST00000605166 638 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 AL450270.1-201ENST00000606160 391 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.37□□□□□ -1.55
CLCNKAP51800 AL159169.2-201ENST00000610061 1269 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 AC015712.7-201ENST00000615211 635 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
CLCNKAP51800 AP003499.2-201ENST00000624100 483 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CLCNKAP51800 AC027228.2-201ENST00000567141 2154 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLCNKAP51800 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CLCNKAP51800 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLCNKAP51800 OR9K1P-202ENST00000641111 3217 ntBASIC5.37□□□□□ -1.55
CLCNKAP51800 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLCNKAP51800 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLCNKAP51800 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLCNKAP51800 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.37□□□□□ -1.55
CLCNKAP51800 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLCNKAP51800 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLCNKAP51800 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
CLCNKAP51800 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLCNKAP51800 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCNKAP51800 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCNKAP51800 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLCNKAP51800 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCNKAP51800 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCNKAP51800 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCNKAP51800 SNORA16A-201ENST00000384342 137 ntBASIC5.36□□□□□ -1.55
CLCNKAP51800 RNU1-77P-201ENST00000390868 162 ntBASIC5.36□□□□□ -1.55
CLCNKAP51800 AL390774.1-201ENST00000411924 246 ntBASIC5.36□□□□□ -1.55
CLCNKAP51800 Z68694.1-201ENST00000413929 841 ntBASIC5.36□□□□□ -1.55
CLCNKAP51800 BX510359.3-201ENST00000422168 306 ntBASIC5.36□□□□□ -1.55
CLCNKAP51800 SRSF1P1-201ENST00000424058 520 ntBASIC5.36□□□□□ -1.55
CLCNKAP51800 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.36□□□□□ -1.55
CLCNKAP51800 RPL31P20-201ENST00000449593 360 ntBASIC5.36□□□□□ -1.55
CLCNKAP51800 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.36□□□□□ -1.55
CLCNKAP51800 AP002345.1-201ENST00000456493 928 ntBASIC5.36□□□□□ -1.55
CLCNKAP51800 AC026348.1-201ENST00000462549 1053 ntBASIC5.36□□□□□ -1.55
CLCNKAP51800 PSAT1P4-201ENST00000466500 526 ntBASIC5.36□□□□□ -1.55
CLCNKAP51800 AC022336.1-201ENST00000475510 337 ntBASIC5.36□□□□□ -1.55
CLCNKAP51800 RN7SL629P-201ENST00000489622 285 ntBASIC5.36□□□□□ -1.55
CLCNKAP51800 GLUD1P3-202ENST00000508551 200 ntBASIC5.36□□□□□ -1.55
CLCNKAP51800 MTND6P2-201ENST00000512226 524 ntBASIC5.36□□□□□ -1.55
CLCNKAP51800 SCARNA16.4-201ENST00000516956 187 ntBASIC5.36□□□□□ -1.55
CLCNKAP51800 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.36□□□□□ -1.55
CLCNKAP51800 AC126177.5-201ENST00000549599 178 ntBASIC5.36□□□□□ -1.55
CLCNKAP51800 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms