Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 SYPL1P2-201ENST00000582878 727 ntBASIC6.74□□□□□ -1.33
MRE11P49959 AL450336.1-201ENST00000605180 586 ntBASIC6.74□□□□□ -1.33
MRE11P49959 AC004241.3-201ENST00000611728 517 ntBASIC6.74□□□□□ -1.33
MRE11P49959 RN7SL787P-201ENST00000613000 284 ntBASIC6.74□□□□□ -1.33
MRE11P49959 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.74□□□□□ -1.33
MRE11P49959 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.74□□□□□ -1.33
MRE11P49959 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
MRE11P49959 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
MRE11P49959 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.74□□□□□ -1.33
MRE11P49959 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MRE11P49959 AC117409.1-201ENST00000470499 1310 ntBASIC6.74□□□□□ -1.33
MRE11P49959 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MRE11P49959 AC015689.2-201ENST00000528172 1738 ntBASIC6.73□□□□□ -1.33
MRE11P49959 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
MRE11P49959 SMG1P5-202ENST00000529428 4219 ntBASIC6.73□□□□□ -1.33
MRE11P49959 SMG1P2-201ENST00000566127 4221 ntBASIC6.73□□□□□ -1.33
MRE11P49959 AC006484.1-201ENST00000435086 1884 ntBASIC6.73□□□□□ -1.33
MRE11P49959 AC009501.3-201ENST00000605001 1352 ntBASIC6.73□□□□□ -1.33
MRE11P49959 AL133243.2-201ENST00000610331 1621 ntBASIC6.73□□□□□ -1.33
MRE11P49959 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
MRE11P49959 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
MRE11P49959 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.73□□□□□ -1.33
MRE11P49959 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
MRE11P49959 RNA5SP375-201ENST00000362975 119 ntBASIC6.73□□□□□ -1.33
MRE11P49959 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.73□□□□□ -1.33
MRE11P49959 RNU1-136P-201ENST00000384181 164 ntBASIC6.73□□□□□ -1.33
MRE11P49959 RPS3AP2-201ENST00000407190 754 ntBASIC6.73□□□□□ -1.33
MRE11P49959 RN7SKP293-201ENST00000411389 296 ntBASIC6.73□□□□□ -1.33
MRE11P49959 OR51B3P-201ENST00000412287 913 ntBASIC6.73□□□□□ -1.33
MRE11P49959 AC107081.1-201ENST00000414975 361 ntBASIC6.73□□□□□ -1.33
MRE11P49959 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.73□□□□□ -1.33
MRE11P49959 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.73□□□□□ -1.33
MRE11P49959 OR10T1P-201ENST00000424327 947 ntBASIC6.73□□□□□ -1.33
MRE11P49959 RPS7P14-201ENST00000426405 583 ntBASIC6.73□□□□□ -1.33
MRE11P49959 AC083862.1-201ENST00000427378 1242 ntBASIC6.73□□□□□ -1.33
MRE11P49959 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.73□□□□□ -1.33
MRE11P49959 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.73□□□□□ -1.33
MRE11P49959 MTND2P5-201ENST00000432656 1006 ntBASIC6.73□□□□□ -1.33
MRE11P49959 AL035246.1-201ENST00000433554 1255 ntBASIC6.73□□□□□ -1.33
MRE11P49959 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.73□□□□□ -1.33
MRE11P49959 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.73□□□□□ -1.33
MRE11P49959 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC6.73□□□□□ -1.33
MRE11P49959 TCEA1P3-201ENST00000443005 880 ntBASIC6.73□□□□□ -1.33
MRE11P49959 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.73□□□□□ -1.33
MRE11P49959 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.73□□□□□ -1.33
MRE11P49959 AL512593.1-201ENST00000444758 779 ntBASIC6.73□□□□□ -1.33
MRE11P49959 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.73□□□□□ -1.33
MRE11P49959 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.73□□□□□ -1.33
MRE11P49959 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.73□□□□□ -1.33
MRE11P49959 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.73□□□□□ -1.33
MRE11P49959 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.73□□□□□ -1.33
MRE11P49959 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.73□□□□□ -1.33
MRE11P49959 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC6.73□□□□□ -1.33
MRE11P49959 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC6.73□□□□□ -1.33
MRE11P49959 RNU6-491P-201ENST00000516099 110 ntBASIC6.73□□□□□ -1.33
MRE11P49959 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
MRE11P49959 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC6.73□□□□□ -1.33
MRE11P49959 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC6.73□□□□□ -1.33
MRE11P49959 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.73□□□□□ -1.33
MRE11P49959 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.73□□□□□ -1.33
MRE11P49959 GLRXP2-201ENST00000555594 321 ntBASIC6.73□□□□□ -1.33
MRE11P49959 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.73□□□□□ -1.33
MRE11P49959 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.73□□□□□ -1.33
MRE11P49959 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.73□□□□□ -1.33
MRE11P49959 MIR4433B-201ENST00000581329 102 ntBASIC6.73□□□□□ -1.33
MRE11P49959 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC6.73□□□□□ -1.33
MRE11P49959 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.73□□□□□ -1.33
MRE11P49959 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
MRE11P49959 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.73□□□□□ -1.33
MRE11P49959 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
MRE11P49959 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC6.73□□□□□ -1.33
MRE11P49959 HIRAP1-201ENST00000605318 787 ntBASIC6.73□□□□□ -1.33
MRE11P49959 RPSAP75-201ENST00000605848 301 ntBASIC6.73□□□□□ -1.33
MRE11P49959 AC012557.2-201ENST00000605919 418 ntBASIC6.73□□□□□ -1.33
MRE11P49959 AC010632.3-201ENST00000611377 369 ntBASIC6.73□□□□□ -1.33
MRE11P49959 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
MRE11P49959 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.73□□□□□ -1.33
MRE11P49959 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.73□□□□□ -1.33
MRE11P49959 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.73□□□□□ -1.33
MRE11P49959 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.73□□□□□ -1.33
MRE11P49959 FRG1EP-201ENST00000634469 770 ntBASIC6.73□□□□□ -1.33
MRE11P49959 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
MRE11P49959 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
MRE11P49959 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.73□□□□□ -1.33
MRE11P49959 MRRFP1-201ENST00000435941 1675 ntBASIC6.73□□□□□ -1.33
MRE11P49959 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
MRE11P49959 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.73□□□□□ -1.33
MRE11P49959 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
MRE11P49959 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
MRE11P49959 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.72□□□□□ -1.33
MRE11P49959 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
MRE11P49959 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.72□□□□□ -1.33
MRE11P49959 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.72□□□□□ -1.33
MRE11P49959 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
MRE11P49959 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
MRE11P49959 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
MRE11P49959 RNU1-49P-201ENST00000363468 159 ntBASIC6.72□□□□□ -1.33
MRE11P49959 RN7SKP292-201ENST00000365522 317 ntBASIC6.72□□□□□ -1.33
MRE11P49959 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
MRE11P49959 RNA5SP91-201ENST00000390902 119 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms