Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.94□□□□□ -1.46
NEDD4P46934 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.94□□□□□ -1.46
NEDD4P46934 TRY2P-201ENST00000448860 689 ntBASIC5.94□□□□□ -1.46
NEDD4P46934 RN7SL826P-201ENST00000479724 288 ntBASIC5.94□□□□□ -1.46
NEDD4P46934 RN7SL441P-201ENST00000492388 296 ntBASIC5.94□□□□□ -1.46
NEDD4P46934 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.94□□□□□ -1.46
NEDD4P46934 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEDD4P46934 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.94□□□□□ -1.46
NEDD4P46934 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEDD4P46934 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.94□□□□□ -1.46
NEDD4P46934 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.94□□□□□ -1.46
NEDD4P46934 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.94□□□□□ -1.46
NEDD4P46934 AC005377.1-201ENST00000605126 456 ntBASIC5.94□□□□□ -1.46
NEDD4P46934 AC133644.2-201ENST00000608142 540 ntBASIC5.94□□□□□ -1.46
NEDD4P46934 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
NEDD4P46934 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.94□□□□□ -1.46
NEDD4P46934 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
NEDD4P46934 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NEDD4P46934 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NEDD4P46934 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NEDD4P46934 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NEDD4P46934 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
NEDD4P46934 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NEDD4P46934 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
NEDD4P46934 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
NEDD4P46934 AC100778.3-201ENST00000580060 1750 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.93□□□□□ -1.46
NEDD4P46934 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.93□□□□□ -1.46
NEDD4P46934 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NEDD4P46934 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NEDD4P46934 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NEDD4P46934 AC007996.1-201ENST00000620414 2821 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NEDD4P46934 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NEDD4P46934 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NEDD4P46934 RNA5SP123-201ENST00000363244 119 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 LRRC37BP1-201ENST00000398851 714 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 PEX12P1-201ENST00000400284 1048 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.93□□□□□ -1.46
NEDD4P46934 NPM1P22-201ENST00000427761 952 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 AL450023.3-201ENST00000440592 271 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.93□□□□□ -1.46
NEDD4P46934 TCEA1P3-201ENST00000443005 880 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 OR7E125P-201ENST00000443450 846 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 HMGB1P4-201ENST00000455362 567 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 snoU13.20-201ENST00000459180 104 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 RN7SL329P-201ENST00000467740 299 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 AC008410.1-201ENST00000483777 339 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 AC125612.1-201ENST00000547580 377 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.93□□□□□ -1.46
NEDD4P46934 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.93□□□□□ -1.46
NEDD4P46934 AC007448.1-201ENST00000582714 234 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 AC010503.3-201ENST00000594355 540 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 AC018695.5-201ENST00000605872 315 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 AC005899.7-201ENST00000618199 588 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 AC087821.1-201ENST00000623639 567 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
NEDD4P46934 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.93□□□□□ -1.46
NEDD4P46934 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
NEDD4P46934 GVINP1-202ENST00000531871 7271 ntBASIC5.93□□□□□ -1.46
NEDD4P46934 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NEDD4P46934 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.92□□□□□ -1.46
NEDD4P46934 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
NEDD4P46934 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
NEDD4P46934 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
NEDD4P46934 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.92□□□□□ -1.46
NEDD4P46934 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
NEDD4P46934 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.92□□□□□ -1.46
NEDD4P46934 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
NEDD4P46934 AL589647.1-201ENST00000402485 466 ntBASIC5.92□□□□□ -1.46
NEDD4P46934 AF186996.5-201ENST00000418098 904 ntBASIC5.92□□□□□ -1.46
NEDD4P46934 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.92□□□□□ -1.46
NEDD4P46934 AC093414.1-201ENST00000434712 514 ntBASIC5.92□□□□□ -1.46
NEDD4P46934 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NEDD4P46934 RPL7P61-201ENST00000451721 751 ntBASIC5.92□□□□□ -1.46
NEDD4P46934 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.92□□□□□ -1.46
NEDD4P46934 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.92□□□□□ -1.46
NEDD4P46934 NMNAT1P1-201ENST00000554095 876 ntBASIC5.92□□□□□ -1.46
NEDD4P46934 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.92□□□□□ -1.46
NEDD4P46934 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.92□□□□□ -1.46
NEDD4P46934 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.92□□□□□ -1.46
NEDD4P46934 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.92□□□□□ -1.46
NEDD4P46934 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.92□□□□□ -1.46
NEDD4P46934 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.92□□□□□ -1.46
NEDD4P46934 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.92□□□□□ -1.46
NEDD4P46934 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NEDD4P46934 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NEDD4P46934 AC022417.1-201ENST00000624768 1303 ntBASIC5.92□□□□□ -1.46
NEDD4P46934 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.92□□□□□ -1.46
NEDD4P46934 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NEDD4P46934 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
NEDD4P46934 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NEDD4P46934 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NEDD4P46934 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.91□□□□□ -1.46
NEDD4P46934 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.91□□□□□ -1.46
NEDD4P46934 AC063976.2-201ENST00000425667 3556 ntBASIC5.91□□□□□ -1.46
NEDD4P46934 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
NEDD4P46934 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms