Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMAP28067 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 RNU1-150P-201ENST00000362491 162 ntBASIC4.46□□□□□ -1.7
HLA-DMAP28067 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMAP28067 MIR191-201ENST00000384873 92 ntBASIC4.46□□□□□ -1.7
HLA-DMAP28067 RNA5SP372-201ENST00000390836 115 ntBASIC4.46□□□□□ -1.7
HLA-DMAP28067 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMAP28067 AL592291.1-201ENST00000403830 352 ntBASIC4.46□□□□□ -1.7
HLA-DMAP28067 MIR1203-201ENST00000408812 85 ntBASIC4.46□□□□□ -1.7
HLA-DMAP28067 MORN2-202ENST00000409077 465 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 OR2X1P-201ENST00000421144 687 ntBASIC4.46□□□□□ -1.7
HLA-DMAP28067 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 AC009238.2-201ENST00000431026 355 ntBASIC4.46□□□□□ -1.7
HLA-DMAP28067 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMAP28067 MRPL48P1-201ENST00000445390 636 ntBASIC4.46□□□□□ -1.7
HLA-DMAP28067 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMAP28067 AC091874.2-201ENST00000505889 720 ntBASIC4.46□□□□□ -1.7
HLA-DMAP28067 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 AC114781.3-201ENST00000512083 142 ntBASIC4.46□□□□□ -1.7
HLA-DMAP28067 SCARNA16.4-201ENST00000516956 187 ntBASIC4.46□□□□□ -1.7
HLA-DMAP28067 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 AP004607.2-201ENST00000533949 322 ntBASIC4.46□□□□□ -1.7
HLA-DMAP28067 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 AC079905.1-201ENST00000549280 475 ntBASIC4.46□□□□□ -1.7
HLA-DMAP28067 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 AL121839.1-201ENST00000556233 1185 ntBASIC4.46□□□□□ -1.7
HLA-DMAP28067 CYCSP38-201ENST00000559840 322 ntBASIC4.46□□□□□ -1.7
HLA-DMAP28067 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMAP28067 MRPS21P7-201ENST00000566937 238 ntBASIC4.46□□□□□ -1.7
HLA-DMAP28067 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMAP28067 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMAP28067 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 TEX41-279ENST00000629149 609 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMAP28067 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMAP28067 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMAP28067 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMAP28067 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMAP28067 AC092435.4-201ENST00000623012 4159 ntBASIC4.46□□□□□ -1.7
HLA-DMAP28067 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMAP28067 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HLA-DMAP28067 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMAP28067 SCARNA15-201ENST00000607520 4325 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 AC107068.1-201ENST00000563286 4218 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMAP28067 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMAP28067 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMAP28067 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMAP28067 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMAP28067 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMAP28067 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMAP28067 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMAP28067 RNA5SP477-201ENST00000362639 119 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 RN7SKP250-201ENST00000363924 321 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 SNORA16A-201ENST00000384342 137 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMAP28067 AL160275.2-201ENST00000412010 394 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 CKS1BP6-201ENST00000424932 240 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 AC127526.2-201ENST00000426436 775 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 MTND6P18-201ENST00000439477 513 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 PCNPP2-201ENST00000441651 455 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 RN7SL189P-201ENST00000468631 289 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 AC058823.1-201ENST00000485315 474 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 AC074087.1-201ENST00000512059 724 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 SNORA70.20-201ENST00000516848 126 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms