Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
BDNFP23560 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
BDNFP23560 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
BDNFP23560 GAPDHP24-201ENST00000328713 983 ntBASIC5.94□□□□□ -1.46
BDNFP23560 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
BDNFP23560 RN7SKP160-201ENST00000363804 340 ntBASIC5.94□□□□□ -1.46
BDNFP23560 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
BDNFP23560 RNU11-201ENST00000387069 134 ntBASIC5.94□□□□□ -1.46
BDNFP23560 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.94□□□□□ -1.46
BDNFP23560 AL358176.3-201ENST00000420757 454 ntBASIC5.94□□□□□ -1.46
BDNFP23560 RPL12P34-201ENST00000424532 479 ntBASIC5.94□□□□□ -1.46
BDNFP23560 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.94□□□□□ -1.46
BDNFP23560 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.94□□□□□ -1.46
BDNFP23560 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.94□□□□□ -1.46
BDNFP23560 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.94□□□□□ -1.46
BDNFP23560 MTND6P18-201ENST00000439477 513 ntBASIC5.94□□□□□ -1.46
BDNFP23560 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.94□□□□□ -1.46
BDNFP23560 RANP1-206ENST00000455094 651 ntBASIC5.94□□□□□ -1.46
BDNFP23560 APOOP2-201ENST00000461561 539 ntBASIC5.94□□□□□ -1.46
BDNFP23560 RPL35AP19-201ENST00000469425 329 ntBASIC5.94□□□□□ -1.46
BDNFP23560 RN7SL184P-201ENST00000488308 297 ntBASIC5.94□□□□□ -1.46
BDNFP23560 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.94□□□□□ -1.46
BDNFP23560 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.94□□□□□ -1.46
BDNFP23560 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
BDNFP23560 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.94□□□□□ -1.46
BDNFP23560 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.94□□□□□ -1.46
BDNFP23560 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.94□□□□□ -1.46
BDNFP23560 MIR4489-201ENST00000578869 62 ntBASIC5.94□□□□□ -1.46
BDNFP23560 DHFRP1-201ENST00000579682 559 ntBASIC5.94□□□□□ -1.46
BDNFP23560 MIR4311-201ENST00000580794 100 ntBASIC5.94□□□□□ -1.46
BDNFP23560 MIR548Y-201ENST00000582739 110 ntBASIC5.94□□□□□ -1.46
BDNFP23560 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.94□□□□□ -1.46
BDNFP23560 AC005242.1-201ENST00000585658 438 ntBASIC5.94□□□□□ -1.46
BDNFP23560 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.94□□□□□ -1.46
BDNFP23560 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.94□□□□□ -1.46
BDNFP23560 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.94□□□□□ -1.46
BDNFP23560 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.94□□□□□ -1.46
BDNFP23560 AL360012.1-201ENST00000602813 131 ntBASIC5.94□□□□□ -1.46
BDNFP23560 AC090525.3-201ENST00000605601 189 ntBASIC5.94□□□□□ -1.46
BDNFP23560 PPATP2-201ENST00000605635 508 ntBASIC5.94□□□□□ -1.46
BDNFP23560 NANOGP3-201ENST00000605855 286 ntBASIC5.94□□□□□ -1.46
BDNFP23560 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.94□□□□□ -1.46
BDNFP23560 AC079395.2-201ENST00000610982 737 ntBASIC5.94□□□□□ -1.46
BDNFP23560 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.94□□□□□ -1.46
BDNFP23560 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
BDNFP23560 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.94□□□□□ -1.46
BDNFP23560 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
BDNFP23560 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.94□□□□□ -1.46
BDNFP23560 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
BDNFP23560 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
BDNFP23560 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
BDNFP23560 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
BDNFP23560 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
BDNFP23560 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.94□□□□□ -1.46
BDNFP23560 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
BDNFP23560 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.94□□□□□ -1.46
BDNFP23560 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
BDNFP23560 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
BDNFP23560 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.93□□□□□ -1.46
BDNFP23560 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
BDNFP23560 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
BDNFP23560 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
BDNFP23560 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.93□□□□□ -1.46
BDNFP23560 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
BDNFP23560 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
BDNFP23560 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.93□□□□□ -1.46
BDNFP23560 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.93□□□□□ -1.46
BDNFP23560 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
BDNFP23560 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.93□□□□□ -1.46
BDNFP23560 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
BDNFP23560 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
BDNFP23560 RN7SKP28-201ENST00000364770 305 ntBASIC5.93□□□□□ -1.46
BDNFP23560 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.93□□□□□ -1.46
BDNFP23560 RPL11P3-201ENST00000395256 523 ntBASIC5.93□□□□□ -1.46
BDNFP23560 AL391361.1-201ENST00000405580 489 ntBASIC5.93□□□□□ -1.46
BDNFP23560 AC096921.1-201ENST00000411661 375 ntBASIC5.93□□□□□ -1.46
BDNFP23560 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
BDNFP23560 AC013404.1-201ENST00000413068 249 ntBASIC5.93□□□□□ -1.46
BDNFP23560 AC073464.3-201ENST00000422564 712 ntBASIC5.93□□□□□ -1.46
BDNFP23560 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
BDNFP23560 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.93□□□□□ -1.46
BDNFP23560 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.93□□□□□ -1.46
BDNFP23560 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.93□□□□□ -1.46
BDNFP23560 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.93□□□□□ -1.46
BDNFP23560 AC005229.2-201ENST00000456995 399 ntBASIC5.93□□□□□ -1.46
BDNFP23560 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.93□□□□□ -1.46
BDNFP23560 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.93□□□□□ -1.46
BDNFP23560 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.93□□□□□ -1.46
BDNFP23560 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.93□□□□□ -1.46
BDNFP23560 MTCO1P31-201ENST00000506355 492 ntBASIC5.93□□□□□ -1.46
BDNFP23560 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.93□□□□□ -1.46
BDNFP23560 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
BDNFP23560 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.93□□□□□ -1.46
BDNFP23560 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.93□□□□□ -1.46
BDNFP23560 NPM1P42-201ENST00000560329 862 ntBASIC5.93□□□□□ -1.46
BDNFP23560 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.93□□□□□ -1.46
BDNFP23560 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.93□□□□□ -1.46
BDNFP23560 AC015720.2-201ENST00000567709 334 ntBASIC5.93□□□□□ -1.46
BDNFP23560 MIR3176-201ENST00000582210 90 ntBASIC5.93□□□□□ -1.46
BDNFP23560 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms