Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 AC079880.2-201ENST00000603790 1213 ntBASIC5.16□□□□□ -1.58
TNFRSF1BP20333 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.16□□□□□ -1.58
TNFRSF1BP20333 RNU4-5P-201ENST00000607255 135 ntBASIC5.16□□□□□ -1.58
TNFRSF1BP20333 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.16□□□□□ -1.58
TNFRSF1BP20333 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 AL929601.4-201ENST00000613011 1341 ntBASIC5.16□□□□□ -1.58
TNFRSF1BP20333 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 AC093671.1-201ENST00000624981 2929 ntBASIC5.16□□□□□ -1.58
TNFRSF1BP20333 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 AC004158.1-201ENST00000564508 4319 ntBASIC5.16□□□□□ -1.58
TNFRSF1BP20333 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFRSF1BP20333 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
TNFRSF1BP20333 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.15□□□□□ -1.58
TNFRSF1BP20333 MFSD8-220ENST00000641243 1422 ntBASIC5.15□□□□□ -1.58
TNFRSF1BP20333 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TNFRSF1BP20333 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
TNFRSF1BP20333 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TNFRSF1BP20333 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TNFRSF1BP20333 AC005005.4-201ENST00000623789 16698 ntBASIC5.15□□□□□ -1.58
TNFRSF1BP20333 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TNFRSF1BP20333 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
TNFRSF1BP20333 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
TNFRSF1BP20333 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
TNFRSF1BP20333 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TNFRSF1BP20333 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 TATDN1P1-201ENST00000414123 891 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 SNRPFP2-201ENST00000440710 251 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AL358794.1-201ENST00000445689 381 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AL596266.1-201ENST00000448132 400 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 BUD31P2-201ENST00000449374 300 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AC083899.1-201ENST00000454465 3819 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 RN7SL583P-201ENST00000475692 287 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AC016687.1-201ENST00000482574 353 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AC008410.1-201ENST00000483777 339 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 RN7SL612P-201ENST00000497704 295 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AC118465.1-201ENST00000513820 1271 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AC091163.3-201ENST00000518269 1144 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 BUD31P1-201ENST00000521828 359 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AC084121.1-201ENST00000533882 835 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AP000619.2-201ENST00000546014 969 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AC125611.1-201ENST00000549563 229 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AC010735.1-201ENST00000567305 1026 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AC010547.7-201ENST00000570323 333 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 MTND3P13-201ENST00000574391 343 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 MIR4311-201ENST00000580794 100 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AC063977.5-201ENST00000601044 974 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 GAS5-AS1-201ENST00000602767 694 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 AC069304.3-201ENST00000603938 1084 ntBASIC5.15□□□□□ -1.59
TNFRSF1BP20333 QTRT1P1-201ENST00000604344 1078 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms