Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC009220.1-201ENST00000451614 275 ntBASIC5.64□□□□□ -1.51
COL11A1P12107 NUTF2P7-201ENST00000453086 375 ntBASIC5.64□□□□□ -1.51
COL11A1P12107 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.64□□□□□ -1.51
COL11A1P12107 OR52A4P-201ENST00000472867 958 ntBASIC5.64□□□□□ -1.51
COL11A1P12107 ENPP7P9-201ENST00000514456 627 ntBASIC5.64□□□□□ -1.51
COL11A1P12107 C1GALT1P3-201ENST00000522049 819 ntBASIC5.64□□□□□ -1.51
COL11A1P12107 AC233699.1-201ENST00000569955 1168 ntBASIC5.64□□□□□ -1.51
COL11A1P12107 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.64□□□□□ -1.51
COL11A1P12107 AC104687.2-201ENST00000604442 342 ntBASIC5.64□□□□□ -1.51
COL11A1P12107 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.64□□□□□ -1.51
COL11A1P12107 AC108359.1-201ENST00000616451 1211 ntBASIC5.64□□□□□ -1.51
COL11A1P12107 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.64□□□□□ -1.51
COL11A1P12107 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL11A1P12107 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL11A1P12107 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL11A1P12107 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.64□□□□□ -1.51
COL11A1P12107 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
COL11A1P12107 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL11A1P12107 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL11A1P12107 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL11A1P12107 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL11A1P12107 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.64□□□□□ -1.51
COL11A1P12107 AL137058.3-201ENST00000624531 3099 ntBASIC5.64□□□□□ -1.51
COL11A1P12107 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL11A1P12107 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL11A1P12107 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL11A1P12107 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL11A1P12107 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL11A1P12107 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL11A1P12107 SNORA70F-201ENST00000384142 135 ntBASIC5.64□□□□□ -1.51
COL11A1P12107 RPL21P67-201ENST00000402896 478 ntBASIC5.64□□□□□ -1.51
COL11A1P12107 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.64□□□□□ -1.51
COL11A1P12107 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.64□□□□□ -1.51
COL11A1P12107 AC046176.1-201ENST00000435260 1170 ntBASIC5.64□□□□□ -1.51
COL11A1P12107 AC005154.2-201ENST00000438110 379 ntBASIC5.64□□□□□ -1.51
COL11A1P12107 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.64□□□□□ -1.51
COL11A1P12107 AC079168.2-201ENST00000453977 416 ntBASIC5.64□□□□□ -1.51
COL11A1P12107 AC006967.1-201ENST00000467608 589 ntBASIC5.64□□□□□ -1.51
COL11A1P12107 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.64□□□□□ -1.51
COL11A1P12107 MIR5699-201ENST00000578903 90 ntBASIC5.64□□□□□ -1.51
COL11A1P12107 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.64□□□□□ -1.51
COL11A1P12107 AC068831.8-201ENST00000620171 435 ntBASIC5.64□□□□□ -1.51
COL11A1P12107 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.64□□□□□ -1.51
COL11A1P12107 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL11A1P12107 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL11A1P12107 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL11A1P12107 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL11A1P12107 AL592148.3-201ENST00000608771 2646 ntBASIC5.64□□□□□ -1.51
COL11A1P12107 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.64□□□□□ -1.51
COL11A1P12107 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.64□□□□□ -1.51
COL11A1P12107 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL11A1P12107 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL11A1P12107 AL442639.1-201ENST00000625030 1899 ntBASIC5.63□□□□□ -1.51
COL11A1P12107 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL11A1P12107 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.63□□□□□ -1.51
COL11A1P12107 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.63□□□□□ -1.51
COL11A1P12107 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.63□□□□□ -1.51
COL11A1P12107 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL11A1P12107 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL11A1P12107 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL11A1P12107 OR4K15-201ENST00000305051 1216 ntBASIC5.63□□□□□ -1.51
COL11A1P12107 RNU1-82P-201ENST00000390851 165 ntBASIC5.63□□□□□ -1.51
COL11A1P12107 AL021331.1-201ENST00000402817 582 ntBASIC5.63□□□□□ -1.51
COL11A1P12107 TBCAP2-201ENST00000416175 326 ntBASIC5.63□□□□□ -1.51
COL11A1P12107 BX510359.2-201ENST00000417920 305 ntBASIC5.63□□□□□ -1.51
COL11A1P12107 AF186996.5-201ENST00000418098 904 ntBASIC5.63□□□□□ -1.51
COL11A1P12107 RPL12P43-201ENST00000420608 499 ntBASIC5.63□□□□□ -1.51
COL11A1P12107 PRPF38AP1-201ENST00000451976 933 ntBASIC5.63□□□□□ -1.51
COL11A1P12107 AC234781.3-201ENST00000452540 973 ntBASIC5.63□□□□□ -1.51
COL11A1P12107 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.63□□□□□ -1.51
COL11A1P12107 ENPP7P11-201ENST00000505915 627 ntBASIC5.63□□□□□ -1.51
COL11A1P12107 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.63□□□□□ -1.51
COL11A1P12107 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.63□□□□□ -1.51
COL11A1P12107 SOX5P1-201ENST00000524155 1127 ntBASIC5.63□□□□□ -1.51
COL11A1P12107 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.63□□□□□ -1.51
COL11A1P12107 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.63□□□□□ -1.51
COL11A1P12107 AC010424.2-201ENST00000607594 443 ntBASIC5.63□□□□□ -1.51
COL11A1P12107 AC087821.1-201ENST00000623639 567 ntBASIC5.63□□□□□ -1.51
COL11A1P12107 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
COL11A1P12107 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL11A1P12107 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL11A1P12107 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL11A1P12107 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
COL11A1P12107 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL11A1P12107 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
COL11A1P12107 AC099654.2-201ENST00000433031 1980 ntBASIC5.63□□□□□ -1.51
COL11A1P12107 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL11A1P12107 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
COL11A1P12107 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL11A1P12107 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
COL11A1P12107 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.63□□□□□ -1.51
COL11A1P12107 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
COL11A1P12107 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
COL11A1P12107 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL11A1P12107 SNORA48.4-201ENST00000391089 134 ntBASIC5.62□□□□□ -1.51
COL11A1P12107 RPL7P58-201ENST00000402913 758 ntBASIC5.62□□□□□ -1.51
COL11A1P12107 AL354868.1-201ENST00000417077 482 ntBASIC5.62□□□□□ -1.51
COL11A1P12107 QRSL1P2-201ENST00000418582 964 ntBASIC5.62□□□□□ -1.51
COL11A1P12107 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.62□□□□□ -1.51
COL11A1P12107 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms