Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC097063.1-201ENST00000426714 1797 ntBASIC4.09□□□□□ -1.76
CD28P10747 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CD28P10747 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CD28P10747 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.09□□□□□ -1.76
CD28P10747 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
CD28P10747 DDX18P6-201ENST00000450119 1997 ntBASIC4.09□□□□□ -1.76
CD28P10747 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CD28P10747 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.09□□□□□ -1.76
CD28P10747 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CD28P10747 AC020633.1-201ENST00000468439 2247 ntBASIC4.09□□□□□ -1.76
CD28P10747 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CD28P10747 AP001029.2-203ENST00000589795 4910 ntBASIC4.09□□□□□ -1.76
CD28P10747 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CD28P10747 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD28P10747 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CD28P10747 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.08□□□□□ -1.76
CD28P10747 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.08□□□□□ -1.76
CD28P10747 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CD28P10747 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD28P10747 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.08□□□□□ -1.76
CD28P10747 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD28P10747 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CD28P10747 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
CD28P10747 RNU1-146P-201ENST00000364015 165 ntBASIC4.08□□□□□ -1.76
CD28P10747 RNA5SP455-201ENST00000365190 119 ntBASIC4.08□□□□□ -1.76
CD28P10747 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CD28P10747 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CD28P10747 SNORA51.8-201ENST00000384234 132 ntBASIC4.08□□□□□ -1.76
CD28P10747 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD28P10747 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD28P10747 GJA6P-201ENST00000415117 1042 ntBASIC4.08□□□□□ -1.76
CD28P10747 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.08□□□□□ -1.76
CD28P10747 AC013268.2-201ENST00000420753 337 ntBASIC4.08□□□□□ -1.76
CD28P10747 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CD28P10747 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.08□□□□□ -1.76
CD28P10747 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.08□□□□□ -1.76
CD28P10747 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.08□□□□□ -1.76
CD28P10747 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.08□□□□□ -1.76
CD28P10747 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CD28P10747 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.08□□□□□ -1.76
CD28P10747 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.08□□□□□ -1.76
CD28P10747 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.08□□□□□ -1.76
CD28P10747 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.08□□□□□ -1.76
CD28P10747 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.08□□□□□ -1.76
CD28P10747 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.08□□□□□ -1.76
CD28P10747 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD28P10747 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.08□□□□□ -1.76
CD28P10747 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.08□□□□□ -1.76
CD28P10747 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CD28P10747 AL359715.3-201ENST00000569267 2123 ntBASIC4.08□□□□□ -1.76
CD28P10747 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.08□□□□□ -1.76
CD28P10747 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.08□□□□□ -1.76
CD28P10747 MIR4480-201ENST00000582492 71 ntBASIC4.08□□□□□ -1.76
CD28P10747 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.08□□□□□ -1.76
CD28P10747 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.08□□□□□ -1.76
CD28P10747 FAM25E-202ENST00000608562 189 ntBASIC4.08□□□□□ -1.76
CD28P10747 AC244107.2-201ENST00000611773 76 ntBASIC4.08□□□□□ -1.76
CD28P10747 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.08□□□□□ -1.76
CD28P10747 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.08□□□□□ -1.76
CD28P10747 MIR6133-201ENST00000617057 108 ntBASIC4.08□□□□□ -1.76
CD28P10747 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
CD28P10747 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.08□□□□□ -1.76
CD28P10747 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
CD28P10747 PANDAR-201ENST00000629595 1506 ntBASIC4.08□□□□□ -1.76
CD28P10747 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.08□□□□□ -1.76
CD28P10747 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD28P10747 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CD28P10747 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.08□□□□□ -1.76
CD28P10747 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD28P10747 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.08□□□□□ -1.76
CD28P10747 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD28P10747 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CD28P10747 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CD28P10747 THAP12P4-201ENST00000528321 2266 ntBASIC4.07□□□□□ -1.76
CD28P10747 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CD28P10747 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CD28P10747 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.07□□□□□ -1.76
CD28P10747 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CD28P10747 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.07□□□□□ -1.76
CD28P10747 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.07□□□□□ -1.76
CD28P10747 AC003973.3-201ENST00000624863 2822 ntBASIC4.07□□□□□ -1.76
CD28P10747 CASC19-221ENST00000641309 1382 ntBASIC4.07□□□□□ -1.76
CD28P10747 AL929601.4-201ENST00000613011 1341 ntBASIC4.07□□□□□ -1.76
CD28P10747 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CD28P10747 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.07□□□□□ -1.76
CD28P10747 RN7SKP104-201ENST00000362605 328 ntBASIC4.07□□□□□ -1.76
CD28P10747 U3.3-201ENST00000362986 216 ntBASIC4.07□□□□□ -1.76
CD28P10747 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CD28P10747 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CD28P10747 AL035419.1-201ENST00000397037 564 ntBASIC4.07□□□□□ -1.76
CD28P10747 PPIAP9-201ENST00000403866 498 ntBASIC4.07□□□□□ -1.76
CD28P10747 AC079809.1-201ENST00000415468 276 ntBASIC4.07□□□□□ -1.76
CD28P10747 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.07□□□□□ -1.76
CD28P10747 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.07□□□□□ -1.76
CD28P10747 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.07□□□□□ -1.76
CD28P10747 EI24P4-201ENST00000423683 1078 ntBASIC4.07□□□□□ -1.76
CD28P10747 AC104837.2-201ENST00000427236 424 ntBASIC4.07□□□□□ -1.76
CD28P10747 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.07□□□□□ -1.76
CD28P10747 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.07□□□□□ -1.76
CD28P10747 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms