Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
FREM3P0C091 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
FREM3P0C091 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC4.58□□□□□ -1.68
FREM3P0C091 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
FREM3P0C091 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
FREM3P0C091 RNA5SP345-201ENST00000410646 108 ntBASIC4.58□□□□□ -1.68
FREM3P0C091 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.58□□□□□ -1.68
FREM3P0C091 VTI1BP4-201ENST00000427516 527 ntBASIC4.58□□□□□ -1.68
FREM3P0C091 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.58□□□□□ -1.68
FREM3P0C091 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.58□□□□□ -1.68
FREM3P0C091 SCAND3P1-201ENST00000439854 1060 ntBASIC4.58□□□□□ -1.68
FREM3P0C091 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
FREM3P0C091 AC025164.1-201ENST00000496249 478 ntBASIC4.58□□□□□ -1.68
FREM3P0C091 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.58□□□□□ -1.68
FREM3P0C091 AC004980.4-201ENST00000513375 203 ntBASIC4.58□□□□□ -1.68
FREM3P0C091 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.58□□□□□ -1.68
FREM3P0C091 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.58□□□□□ -1.68
FREM3P0C091 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
FREM3P0C091 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.58□□□□□ -1.68
FREM3P0C091 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.58□□□□□ -1.68
FREM3P0C091 AC112694.2-201ENST00000623697 768 ntBASIC4.58□□□□□ -1.68
FREM3P0C091 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
FREM3P0C091 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
FREM3P0C091 HSPA8P14-201ENST00000552265 1805 ntBASIC4.58□□□□□ -1.68
FREM3P0C091 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.58□□□□□ -1.68
FREM3P0C091 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
FREM3P0C091 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
FREM3P0C091 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
FREM3P0C091 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.58□□□□□ -1.68
FREM3P0C091 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.58□□□□□ -1.68
FREM3P0C091 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.58□□□□□ -1.68
FREM3P0C091 AL031123.3-201ENST00000623345 1837 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
FREM3P0C091 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.57□□□□□ -1.68
FREM3P0C091 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
FREM3P0C091 RNA5SP443-201ENST00000363083 132 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 AL035419.1-201ENST00000397037 564 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 RPL10P10-201ENST00000403509 664 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 AL035079.1-201ENST00000405210 287 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 U3.32-201ENST00000408116 212 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.57□□□□□ -1.68
FREM3P0C091 NIPA2P1-201ENST00000426223 976 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 BX323845.1-201ENST00000432417 179 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 AC009127.1-201ENST00000467090 155 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 RPL7P40-201ENST00000481703 745 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 AC083982.1-201ENST00000485679 344 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 AL049874.2-201ENST00000492636 288 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.57□□□□□ -1.68
FREM3P0C091 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.57□□□□□ -1.68
FREM3P0C091 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
FREM3P0C091 AL391358.1-201ENST00000605342 190 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 AP001521.2-201ENST00000608772 546 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 AP005131.7-201ENST00000610087 611 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 AL353662.3-201ENST00000625131 237 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.57□□□□□ -1.68
FREM3P0C091 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
FREM3P0C091 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
FREM3P0C091 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
FREM3P0C091 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
FREM3P0C091 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
FREM3P0C091 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
FREM3P0C091 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.57□□□□□ -1.68
FREM3P0C091 AL360270.2-201ENST00000562952 5985 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
FREM3P0C091 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.57□□□□□ -1.68
FREM3P0C091 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
FREM3P0C091 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
FREM3P0C091 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
FREM3P0C091 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
FREM3P0C091 RN7SKP149-201ENST00000363008 344 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 AC104837.2-201ENST00000427236 424 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 RPL12P17-201ENST00000432393 498 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.57□□□□□ -1.68
FREM3P0C091 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.57□□□□□ -1.68
FREM3P0C091 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.57□□□□□ -1.68
FREM3P0C091 AL356981.1-201ENST00000454879 684 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.57□□□□□ -1.68
FREM3P0C091 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 AL049839.1-201ENST00000556151 657 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 FRG1EP-201ENST00000634469 770 ntBASIC4.57□□□□□ -1.68
FREM3P0C091 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.57□□□□□ -1.68
FREM3P0C091 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.57□□□□□ -1.68
FREM3P0C091 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
FREM3P0C091 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
FREM3P0C091 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
FREM3P0C091 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
FREM3P0C091 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
FREM3P0C091 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
FREM3P0C091 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
FREM3P0C091 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
FREM3P0C091 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.56□□□□□ -1.68
FREM3P0C091 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
FREM3P0C091 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
FREM3P0C091 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
FREM3P0C091 U3.30-201ENST00000391308 210 ntBASIC4.56□□□□□ -1.68
FREM3P0C091 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
FREM3P0C091 AP002530.1-201ENST00000405705 684 ntBASIC4.56□□□□□ -1.68
FREM3P0C091 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
FREM3P0C091 RSU1P3-201ENST00000412878 835 ntBASIC4.56□□□□□ -1.68
FREM3P0C091 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms