Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC112184.1-201ENST00000505179 312 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 ST13P12-201ENST00000508958 1094 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 AP004607.2-201ENST00000533949 322 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 AC084824.2-201ENST00000548906 345 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 AP003789.1-201ENST00000617737 605 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 AC079776.5-201ENST00000641920 211 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 AC073342.2-201ENST00000595842 1800 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HLA-DOAP06340 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HLA-DOAP06340 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HLA-DOAP06340 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HLA-DOAP06340 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HLA-DOAP06340 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HLA-DOAP06340 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HLA-DOAP06340 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HLA-DOAP06340 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HLA-DOAP06340 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 DUTP5-201ENST00000406790 469 ntBASIC6.4□□□□□ -1.38
HLA-DOAP06340 AMZ2P2-201ENST00000406819 1057 ntBASIC6.4□□□□□ -1.38
HLA-DOAP06340 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 AC092570.3-201ENST00000420113 693 ntBASIC6.4□□□□□ -1.38
HLA-DOAP06340 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 AL392003.1-201ENST00000434394 243 ntBASIC6.4□□□□□ -1.38
HLA-DOAP06340 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 Z77249.1-201ENST00000444622 1175 ntBASIC6.4□□□□□ -1.38
HLA-DOAP06340 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 AL122001.1-201ENST00000457027 370 ntBASIC6.4□□□□□ -1.38
HLA-DOAP06340 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 AC092754.1-201ENST00000472975 479 ntBASIC6.4□□□□□ -1.38
HLA-DOAP06340 RPL7AP6-201ENST00000477943 801 ntBASIC6.4□□□□□ -1.38
HLA-DOAP06340 AC104982.1-201ENST00000478775 574 ntBASIC6.4□□□□□ -1.38
HLA-DOAP06340 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 OR7E10P-201ENST00000526420 991 ntBASIC6.4□□□□□ -1.38
HLA-DOAP06340 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 NMNAT1P5-201ENST00000559657 841 ntBASIC6.4□□□□□ -1.38
HLA-DOAP06340 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 MIR3691-201ENST00000578066 90 ntBASIC6.4□□□□□ -1.38
HLA-DOAP06340 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.4□□□□□ -1.38
HLA-DOAP06340 ELOCP35-201ENST00000604289 336 ntBASIC6.4□□□□□ -1.38
HLA-DOAP06340 TAS2R6P-201ENST00000605022 826 ntBASIC6.4□□□□□ -1.38
HLA-DOAP06340 AC106052.1-201ENST00000608029 497 ntBASIC6.4□□□□□ -1.38
HLA-DOAP06340 AC009163.6-201ENST00000612367 342 ntBASIC6.4□□□□□ -1.38
HLA-DOAP06340 AC118658.2-201ENST00000618697 459 ntBASIC6.4□□□□□ -1.38
HLA-DOAP06340 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HLA-DOAP06340 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HLA-DOAP06340 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HLA-DOAP06340 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HLA-DOAP06340 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.4□□□□□ -1.39
HLA-DOAP06340 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HLA-DOAP06340 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
HLA-DOAP06340 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
HLA-DOAP06340 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
HLA-DOAP06340 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.39□□□□□ -1.39
HLA-DOAP06340 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.39□□□□□ -1.39
HLA-DOAP06340 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HLA-DOAP06340 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HLA-DOAP06340 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
HLA-DOAP06340 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.39□□□□□ -1.39
HLA-DOAP06340 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HLA-DOAP06340 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HLA-DOAP06340 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HLA-DOAP06340 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.39□□□□□ -1.39
HLA-DOAP06340 SNORA70.9-201ENST00000384370 135 ntBASIC6.39□□□□□ -1.39
HLA-DOAP06340 SNORD56.6-201ENST00000384569 71 ntBASIC6.39□□□□□ -1.39
HLA-DOAP06340 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC6.39□□□□□ -1.39
HLA-DOAP06340 AL050305.1-201ENST00000399993 1230 ntBASIC6.39□□□□□ -1.39
HLA-DOAP06340 HSPA8P15-201ENST00000401676 786 ntBASIC6.39□□□□□ -1.39
HLA-DOAP06340 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.39□□□□□ -1.39
HLA-DOAP06340 AL512637.2-201ENST00000431287 1256 ntBASIC6.39□□□□□ -1.39
HLA-DOAP06340 SETP8-201ENST00000435341 628 ntBASIC6.39□□□□□ -1.39
HLA-DOAP06340 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.39□□□□□ -1.39
HLA-DOAP06340 CEACAMP7-201ENST00000444105 496 ntBASIC6.39□□□□□ -1.39
HLA-DOAP06340 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.39□□□□□ -1.39
HLA-DOAP06340 PSAT1P4-201ENST00000466500 526 ntBASIC6.39□□□□□ -1.39
HLA-DOAP06340 AC004453.1-201ENST00000487895 408 ntBASIC6.39□□□□□ -1.39
HLA-DOAP06340 OR2A3P-201ENST00000493774 953 ntBASIC6.39□□□□□ -1.39
HLA-DOAP06340 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.39□□□□□ -1.39
HLA-DOAP06340 NDUFA5P12-201ENST00000503796 343 ntBASIC6.39□□□□□ -1.39
HLA-DOAP06340 SNRPCP2-201ENST00000504370 475 ntBASIC6.39□□□□□ -1.39
HLA-DOAP06340 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms