Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 U3.32-201ENST00000408116 212 ntBASIC4.59□□□□□ -1.67
HLA-DPB1P04440 OR3A2-201ENST00000408891 1076 ntBASIC4.59□□□□□ -1.67
HLA-DPB1P04440 RPL35AP24-201ENST00000413846 330 ntBASIC4.59□□□□□ -1.67
HLA-DPB1P04440 Z68694.1-201ENST00000413929 841 ntBASIC4.59□□□□□ -1.67
HLA-DPB1P04440 PRUNEP1-201ENST00000425846 705 ntBASIC4.59□□□□□ -1.67
HLA-DPB1P04440 AL139148.1-201ENST00000427122 680 ntBASIC4.59□□□□□ -1.67
HLA-DPB1P04440 COX6CP13-201ENST00000428703 226 ntBASIC4.59□□□□□ -1.67
HLA-DPB1P04440 AL121776.1-201ENST00000429337 372 ntBASIC4.59□□□□□ -1.67
HLA-DPB1P04440 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 CYCSP12-201ENST00000437729 300 ntBASIC4.59□□□□□ -1.67
HLA-DPB1P04440 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 PPIAP20-201ENST00000449839 135 ntBASIC4.59□□□□□ -1.67
HLA-DPB1P04440 AL356981.1-201ENST00000454879 684 ntBASIC4.59□□□□□ -1.67
HLA-DPB1P04440 RPL7P45-201ENST00000455851 743 ntBASIC4.59□□□□□ -1.67
HLA-DPB1P04440 AC108161.1-201ENST00000461060 402 ntBASIC4.59□□□□□ -1.67
HLA-DPB1P04440 SIAH1P1-201ENST00000479411 923 ntBASIC4.59□□□□□ -1.67
HLA-DPB1P04440 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 AC106872.4-201ENST00000510050 523 ntBASIC4.59□□□□□ -1.67
HLA-DPB1P04440 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 AC118658.2-201ENST00000618697 459 ntBASIC4.59□□□□□ -1.67
HLA-DPB1P04440 AL442128.2-201ENST00000620246 1824 ntBASIC4.59□□□□□ -1.67
HLA-DPB1P04440 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
HLA-DPB1P04440 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.59□□□□□ -1.68
HLA-DPB1P04440 LINC01355-201ENST00000566551 5444 ntBASIC4.59□□□□□ -1.68
HLA-DPB1P04440 OR55B1P-203ENST00000641518 2602 ntBASIC4.59□□□□□ -1.68
HLA-DPB1P04440 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 CASC19-221ENST00000641309 1382 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 RNA5SP132-201ENST00000364725 118 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 OR8V1P-201ENST00000395193 873 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 SNORA81-201ENST00000408493 178 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 RN7SKP206-201ENST00000410823 293 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 RANP7-201ENST00000418085 644 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 EIF4A1P1-201ENST00000420241 934 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 AL133325.1-201ENST00000421090 382 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 AC091180.1-201ENST00000462104 372 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 RPL7P40-201ENST00000481703 745 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 RPEP1-201ENST00000504507 658 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 RPL7L1P4-201ENST00000513004 707 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 HMGB1P40-201ENST00000525121 540 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 YWHABP2-201ENST00000540201 713 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 DPRXP4-201ENST00000578053 568 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 AC008814.1-201ENST00000603797 406 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 AC097505.1-201ENST00000610199 565 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 MIR6729-201ENST00000618194 65 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 MIR4302-201ENST00000638058 60 ntBASIC4.58□□□□□ -1.68
HLA-DPB1P04440 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
HLA-DPB1P04440 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 AL132656.3-201ENST00000606384 1595 ntBASIC4.57□□□□□ -1.68
HLA-DPB1P04440 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.57□□□□□ -1.68
HLA-DPB1P04440 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HLA-DPB1P04440 AC009804.1-201ENST00000400949 179 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms