Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA1P02708 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA1P02708 AC011503.2-201ENST00000594230 1500 ntBASIC5.66□□□□□ -1.5
CHRNA1P02708 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CHRNA1P02708 AC244033.1-201ENST00000426826 870 ntBASIC5.66□□□□□ -1.5
CHRNA1P02708 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.66□□□□□ -1.5
CHRNA1P02708 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.66□□□□□ -1.5
CHRNA1P02708 AC090602.1-201ENST00000469695 252 ntBASIC5.66□□□□□ -1.5
CHRNA1P02708 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.66□□□□□ -1.5
CHRNA1P02708 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.66□□□□□ -1.5
CHRNA1P02708 RN7SL244P-201ENST00000493405 297 ntBASIC5.66□□□□□ -1.5
CHRNA1P02708 IGBP1P4-201ENST00000503202 879 ntBASIC5.66□□□□□ -1.5
CHRNA1P02708 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.66□□□□□ -1.5
CHRNA1P02708 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.66□□□□□ -1.5
CHRNA1P02708 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.66□□□□□ -1.5
CHRNA1P02708 COX6B1P5-201ENST00000509843 249 ntBASIC5.66□□□□□ -1.5
CHRNA1P02708 OR7H2P-201ENST00000513483 306 ntBASIC5.66□□□□□ -1.5
CHRNA1P02708 HMGN1P9-201ENST00000515212 298 ntBASIC5.66□□□□□ -1.5
CHRNA1P02708 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.66□□□□□ -1.5
CHRNA1P02708 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.66□□□□□ -1.5
CHRNA1P02708 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.66□□□□□ -1.5
CHRNA1P02708 OR7E128P-201ENST00000532736 1024 ntBASIC5.66□□□□□ -1.5
CHRNA1P02708 AC009117.1-201ENST00000563948 554 ntBASIC5.66□□□□□ -1.5
CHRNA1P02708 AL451049.1-201ENST00000608672 497 ntBASIC5.66□□□□□ -1.5
CHRNA1P02708 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.66□□□□□ -1.5
CHRNA1P02708 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.66□□□□□ -1.5
CHRNA1P02708 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.66□□□□□ -1.5
CHRNA1P02708 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.66□□□□□ -1.5
CHRNA1P02708 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.66□□□□□ -1.5
CHRNA1P02708 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CHRNA1P02708 HSPA8P14-201ENST00000552265 1805 ntBASIC5.66□□□□□ -1.5
CHRNA1P02708 ADAM24P-201ENST00000398655 2101 ntBASIC5.66□□□□□ -1.5
CHRNA1P02708 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA1P02708 AC004076.2-201ENST00000620532 3323 ntBASIC5.66□□□□□ -1.5
CHRNA1P02708 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CHRNA1P02708 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.66□□□□□ -1.5
CHRNA1P02708 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNA1P02708 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.65□□□□□ -1.5
CHRNA1P02708 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNA1P02708 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNA1P02708 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.65□□□□□ -1.5
CHRNA1P02708 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNA1P02708 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNA1P02708 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNA1P02708 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNA1P02708 RNU2-22P-201ENST00000411266 212 ntBASIC5.65□□□□□ -1.5
CHRNA1P02708 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNA1P02708 AC234781.4-201ENST00000419384 244 ntBASIC5.65□□□□□ -1.5
CHRNA1P02708 AC013268.2-201ENST00000420753 337 ntBASIC5.65□□□□□ -1.5
CHRNA1P02708 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNA1P02708 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.65□□□□□ -1.5
CHRNA1P02708 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CHRNA1P02708 GYG1P1-201ENST00000460864 698 ntBASIC5.65□□□□□ -1.5
CHRNA1P02708 AC093827.1-201ENST00000480094 861 ntBASIC5.65□□□□□ -1.5
CHRNA1P02708 AC140172.1-201ENST00000502928 141 ntBASIC5.65□□□□□ -1.5
CHRNA1P02708 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.65□□□□□ -1.5
CHRNA1P02708 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.65□□□□□ -1.5
CHRNA1P02708 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.65□□□□□ -1.5
CHRNA1P02708 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.65□□□□□ -1.5
CHRNA1P02708 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.65□□□□□ -1.5
CHRNA1P02708 BNIP3P1-201ENST00000547295 580 ntBASIC5.65□□□□□ -1.5
CHRNA1P02708 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.65□□□□□ -1.5
CHRNA1P02708 EDDM3DP-201ENST00000554692 434 ntBASIC5.65□□□□□ -1.5
CHRNA1P02708 AC079075.1-201ENST00000559543 878 ntBASIC5.65□□□□□ -1.5
CHRNA1P02708 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.65□□□□□ -1.5
CHRNA1P02708 MIR4330-201ENST00000579077 105 ntBASIC5.65□□□□□ -1.5
CHRNA1P02708 ELOCP28-201ENST00000590044 317 ntBASIC5.65□□□□□ -1.5
CHRNA1P02708 AC105254.2-201ENST00000603636 436 ntBASIC5.65□□□□□ -1.5
CHRNA1P02708 AL031320.1-201ENST00000604177 357 ntBASIC5.65□□□□□ -1.5
CHRNA1P02708 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.65□□□□□ -1.5
CHRNA1P02708 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.65□□□□□ -1.5
CHRNA1P02708 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CHRNA1P02708 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CHRNA1P02708 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CHRNA1P02708 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
CHRNA1P02708 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CHRNA1P02708 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CHRNA1P02708 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CHRNA1P02708 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CHRNA1P02708 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.65□□□□□ -1.51
CHRNA1P02708 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CHRNA1P02708 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA1P02708 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA1P02708 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA1P02708 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA1P02708 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA1P02708 AC019072.1-201ENST00000604535 1551 ntBASIC5.64□□□□□ -1.51
CHRNA1P02708 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CHRNA1P02708 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
CHRNA1P02708 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CHRNA1P02708 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.64□□□□□ -1.51
CHRNA1P02708 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.64□□□□□ -1.51
CHRNA1P02708 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA1P02708 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CHRNA1P02708 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CHRNA1P02708 EI24P3-201ENST00000399046 1062 ntBASIC5.64□□□□□ -1.51
CHRNA1P02708 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.64□□□□□ -1.51
CHRNA1P02708 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.64□□□□□ -1.51
CHRNA1P02708 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.64□□□□□ -1.51
CHRNA1P02708 GNG5P5-201ENST00000420444 220 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms