Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
APOEP02649 U3.3-201ENST00000362986 216 ntBASIC5.43□□□□□ -1.54
APOEP02649 AC007618.1-201ENST00000366455 732 ntBASIC5.43□□□□□ -1.54
APOEP02649 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.43□□□□□ -1.54
APOEP02649 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
APOEP02649 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
APOEP02649 MIR589-201ENST00000385238 99 ntBASIC5.43□□□□□ -1.54
APOEP02649 RPL12P9-201ENST00000412942 488 ntBASIC5.43□□□□□ -1.54
APOEP02649 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.43□□□□□ -1.54
APOEP02649 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.43□□□□□ -1.54
APOEP02649 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.43□□□□□ -1.54
APOEP02649 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.43□□□□□ -1.54
APOEP02649 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.43□□□□□ -1.54
APOEP02649 AC009127.1-201ENST00000467090 155 ntBASIC5.43□□□□□ -1.54
APOEP02649 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.43□□□□□ -1.54
APOEP02649 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.43□□□□□ -1.54
APOEP02649 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
APOEP02649 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.43□□□□□ -1.54
APOEP02649 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.43□□□□□ -1.54
APOEP02649 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.43□□□□□ -1.54
APOEP02649 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
APOEP02649 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.43□□□□□ -1.54
APOEP02649 AC008814.1-201ENST00000603797 406 ntBASIC5.43□□□□□ -1.54
APOEP02649 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
APOEP02649 AC011755.1-201ENST00000623763 2049 ntBASIC5.43□□□□□ -1.54
APOEP02649 AC004817.4-201ENST00000602396 3625 ntBASIC5.43□□□□□ -1.54
APOEP02649 TRIM51GP-201ENST00000534741 1350 ntBASIC5.42□□□□□ -1.54
APOEP02649 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
APOEP02649 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.42□□□□□ -1.54
APOEP02649 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
APOEP02649 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
APOEP02649 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
APOEP02649 RNA5SP90-201ENST00000364801 99 ntBASIC5.42□□□□□ -1.54
APOEP02649 RNA5SP223-201ENST00000365174 120 ntBASIC5.42□□□□□ -1.54
APOEP02649 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
APOEP02649 NUDT19P3-201ENST00000404698 555 ntBASIC5.42□□□□□ -1.54
APOEP02649 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
APOEP02649 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
APOEP02649 AL627308.1-201ENST00000435693 821 ntBASIC5.42□□□□□ -1.54
APOEP02649 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.42□□□□□ -1.54
APOEP02649 GAPDHP58-201ENST00000438477 1006 ntBASIC5.42□□□□□ -1.54
APOEP02649 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.42□□□□□ -1.54
APOEP02649 AC005532.2-201ENST00000467154 373 ntBASIC5.42□□□□□ -1.54
APOEP02649 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.42□□□□□ -1.54
APOEP02649 SNRPCP2-201ENST00000504370 475 ntBASIC5.42□□□□□ -1.54
APOEP02649 AC008638.1-201ENST00000506035 866 ntBASIC5.42□□□□□ -1.54
APOEP02649 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.42□□□□□ -1.54
APOEP02649 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.42□□□□□ -1.54
APOEP02649 AC134349.2-201ENST00000535136 910 ntBASIC5.42□□□□□ -1.54
APOEP02649 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
APOEP02649 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.42□□□□□ -1.54
APOEP02649 NPM1P45-201ENST00000583151 559 ntBASIC5.42□□□□□ -1.54
APOEP02649 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
APOEP02649 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.42□□□□□ -1.54
APOEP02649 MIR6839-201ENST00000620425 113 ntBASIC5.42□□□□□ -1.54
APOEP02649 MTCO1P1-201ENST00000624263 1081 ntBASIC5.42□□□□□ -1.54
APOEP02649 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
APOEP02649 MTCO1P46-201ENST00000451639 1491 ntBASIC5.42□□□□□ -1.54
APOEP02649 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.42□□□□□ -1.54
APOEP02649 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
APOEP02649 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
APOEP02649 AC022417.1-201ENST00000624768 1303 ntBASIC5.42□□□□□ -1.54
APOEP02649 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
APOEP02649 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
APOEP02649 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
APOEP02649 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
APOEP02649 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
APOEP02649 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
APOEP02649 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
APOEP02649 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.41□□□□□ -1.54
APOEP02649 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
APOEP02649 AC114947.2-201ENST00000565748 2125 ntBASIC5.41□□□□□ -1.54
APOEP02649 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
APOEP02649 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
APOEP02649 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.41□□□□□ -1.54
APOEP02649 RPL23P2-201ENST00000320371 421 ntBASIC5.41□□□□□ -1.54
APOEP02649 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
APOEP02649 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
APOEP02649 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.41□□□□□ -1.54
APOEP02649 RPL21P67-201ENST00000402896 478 ntBASIC5.41□□□□□ -1.54
APOEP02649 RN7SKP273-201ENST00000411392 314 ntBASIC5.41□□□□□ -1.54
APOEP02649 AC211486.3-201ENST00000412694 621 ntBASIC5.41□□□□□ -1.54
APOEP02649 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
APOEP02649 AC005033.1-201ENST00000428904 813 ntBASIC5.41□□□□□ -1.54
APOEP02649 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.41□□□□□ -1.54
APOEP02649 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.41□□□□□ -1.54
APOEP02649 EEF1B2P5-201ENST00000444820 548 ntBASIC5.41□□□□□ -1.54
APOEP02649 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.41□□□□□ -1.54
APOEP02649 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.41□□□□□ -1.54
APOEP02649 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.41□□□□□ -1.54
APOEP02649 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
APOEP02649 RN7SL727P-201ENST00000482164 296 ntBASIC5.41□□□□□ -1.54
APOEP02649 MYL12BP2-201ENST00000503948 512 ntBASIC5.41□□□□□ -1.54
APOEP02649 ENPP7P11-201ENST00000505915 627 ntBASIC5.41□□□□□ -1.54
APOEP02649 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.41□□□□□ -1.54
APOEP02649 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
APOEP02649 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.41□□□□□ -1.54
APOEP02649 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.41□□□□□ -1.54
APOEP02649 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.41□□□□□ -1.54
APOEP02649 AC127024.5-201ENST00000580085 462 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms