Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RNA5SP392-201ENST00000516905 112 ntBASIC5.92□□□□□ -1.46
COL2A1P02458 AC012339.2-201ENST00000523996 453 ntBASIC5.92□□□□□ -1.46
COL2A1P02458 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
COL2A1P02458 MIR3908-201ENST00000579798 126 ntBASIC5.92□□□□□ -1.46
COL2A1P02458 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.92□□□□□ -1.46
COL2A1P02458 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
COL2A1P02458 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
COL2A1P02458 AC091046.3-201ENST00000631455 1574 ntBASIC5.92□□□□□ -1.46
COL2A1P02458 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL2A1P02458 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.92□□□□□ -1.46
COL2A1P02458 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
COL2A1P02458 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.92□□□□□ -1.46
COL2A1P02458 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL2A1P02458 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.92□□□□□ -1.46
COL2A1P02458 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC5.91□□□□□ -1.46
COL2A1P02458 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL2A1P02458 BX510359.2-201ENST00000417920 305 ntBASIC5.91□□□□□ -1.46
COL2A1P02458 RPL12P43-201ENST00000420608 499 ntBASIC5.91□□□□□ -1.46
COL2A1P02458 AC004074.1-201ENST00000421810 1063 ntBASIC5.91□□□□□ -1.46
COL2A1P02458 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.91□□□□□ -1.46
COL2A1P02458 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.91□□□□□ -1.46
COL2A1P02458 RPL7AP61-201ENST00000443410 636 ntBASIC5.91□□□□□ -1.46
COL2A1P02458 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL2A1P02458 AC011005.3-201ENST00000491624 395 ntBASIC5.91□□□□□ -1.46
COL2A1P02458 HMGB3P14-201ENST00000494195 599 ntBASIC5.91□□□□□ -1.46
COL2A1P02458 AC091917.2-201ENST00000505002 744 ntBASIC5.91□□□□□ -1.46
COL2A1P02458 GTF2IP11-201ENST00000526931 420 ntBASIC5.91□□□□□ -1.46
COL2A1P02458 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.91□□□□□ -1.46
COL2A1P02458 AC027369.5-201ENST00000533838 755 ntBASIC5.91□□□□□ -1.46
COL2A1P02458 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.91□□□□□ -1.46
COL2A1P02458 AC008147.3-201ENST00000548666 354 ntBASIC5.91□□□□□ -1.46
COL2A1P02458 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
COL2A1P02458 TVP23CP2-201ENST00000571473 623 ntBASIC5.91□□□□□ -1.46
COL2A1P02458 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL2A1P02458 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.91□□□□□ -1.46
COL2A1P02458 AC011453.2-201ENST00000603737 729 ntBASIC5.91□□□□□ -1.46
COL2A1P02458 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.91□□□□□ -1.46
COL2A1P02458 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
COL2A1P02458 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.91□□□□□ -1.46
COL2A1P02458 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL2A1P02458 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.91□□□□□ -1.46
COL2A1P02458 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
COL2A1P02458 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL2A1P02458 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL2A1P02458 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL2A1P02458 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.91□□□□□ -1.46
COL2A1P02458 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL2A1P02458 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.91□□□□□ -1.46
COL2A1P02458 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.91□□□□□ -1.46
COL2A1P02458 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.91□□□□□ -1.46
COL2A1P02458 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL2A1P02458 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL2A1P02458 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
COL2A1P02458 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL2A1P02458 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL2A1P02458 AL691447.1-201ENST00000419456 387 ntBASIC5.9□□□□□ -1.46
COL2A1P02458 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.9□□□□□ -1.46
COL2A1P02458 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.9□□□□□ -1.46
COL2A1P02458 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.9□□□□□ -1.46
COL2A1P02458 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.9□□□□□ -1.46
COL2A1P02458 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.9□□□□□ -1.46
COL2A1P02458 AC116562.1-201ENST00000485355 781 ntBASIC5.9□□□□□ -1.46
COL2A1P02458 OR2A3P-201ENST00000493774 953 ntBASIC5.9□□□□□ -1.46
COL2A1P02458 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
COL2A1P02458 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.9□□□□□ -1.46
COL2A1P02458 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.9□□□□□ -1.46
COL2A1P02458 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.9□□□□□ -1.46
COL2A1P02458 MIR4284-201ENST00000578924 81 ntBASIC5.9□□□□□ -1.46
COL2A1P02458 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.9□□□□□ -1.46
COL2A1P02458 BNIP3P22-201ENST00000593399 556 ntBASIC5.9□□□□□ -1.46
COL2A1P02458 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL2A1P02458 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.9□□□□□ -1.46
COL2A1P02458 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
COL2A1P02458 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL2A1P02458 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
COL2A1P02458 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL2A1P02458 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL2A1P02458 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
COL2A1P02458 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL2A1P02458 ECM1P2-201ENST00000503354 1577 ntBASIC5.9□□□□□ -1.47
COL2A1P02458 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.9□□□□□ -1.47
COL2A1P02458 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.9□□□□□ -1.47
COL2A1P02458 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL2A1P02458 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL2A1P02458 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.9□□□□□ -1.47
COL2A1P02458 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL2A1P02458 OR1L6-202ENST00000373684 1044 ntBASIC5.9□□□□□ -1.47
COL2A1P02458 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL2A1P02458 AL049693.1-201ENST00000402760 611 ntBASIC5.9□□□□□ -1.47
COL2A1P02458 GPS2P1-201ENST00000411761 986 ntBASIC5.9□□□□□ -1.47
COL2A1P02458 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.9□□□□□ -1.47
COL2A1P02458 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.9□□□□□ -1.47
COL2A1P02458 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.9□□□□□ -1.47
COL2A1P02458 AC006967.1-201ENST00000467608 589 ntBASIC5.9□□□□□ -1.47
COL2A1P02458 SCARNA22-201ENST00000503991 125 ntBASIC5.9□□□□□ -1.47
COL2A1P02458 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.9□□□□□ -1.47
COL2A1P02458 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
COL2A1P02458 AP006289.1-201ENST00000538089 277 ntBASIC5.9□□□□□ -1.47
COL2A1P02458 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.9□□□□□ -1.47
COL2A1P02458 AC022884.2-201ENST00000578535 580 ntBASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms