Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC027369.2-201ENST00000528030 440 ntBASIC5.13□□□□□ -1.59
SHOX2O60902 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.13□□□□□ -1.59
SHOX2O60902 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SHOX2O60902 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.13□□□□□ -1.59
SHOX2O60902 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.13□□□□□ -1.59
SHOX2O60902 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.13□□□□□ -1.59
SHOX2O60902 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.13□□□□□ -1.59
SHOX2O60902 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
SHOX2O60902 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.13□□□□□ -1.59
SHOX2O60902 BNIP3P35-201ENST00000604530 490 ntBASIC5.13□□□□□ -1.59
SHOX2O60902 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.13□□□□□ -1.59
SHOX2O60902 MIR6730-201ENST00000622213 67 ntBASIC5.13□□□□□ -1.59
SHOX2O60902 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.13□□□□□ -1.59
SHOX2O60902 AL672167.1-203ENST00000641299 2975 ntBASIC5.13□□□□□ -1.59
SHOX2O60902 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.13□□□□□ -1.59
SHOX2O60902 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHOX2O60902 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.13□□□□□ -1.59
SHOX2O60902 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
SHOX2O60902 AC068254.2-201ENST00000623938 3577 ntBASIC5.12□□□□□ -1.59
SHOX2O60902 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.12□□□□□ -1.59
SHOX2O60902 MAPK10-286ENST00000641208 8747 ntBASIC5.12□□□□□ -1.59
SHOX2O60902 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHOX2O60902 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SHOX2O60902 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHOX2O60902 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHOX2O60902 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHOX2O60902 RMRPP5-201ENST00000411156 267 ntBASIC5.12□□□□□ -1.59
SHOX2O60902 AL160275.2-201ENST00000412010 394 ntBASIC5.12□□□□□ -1.59
SHOX2O60902 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.12□□□□□ -1.59
SHOX2O60902 AC005033.1-201ENST00000428904 813 ntBASIC5.12□□□□□ -1.59
SHOX2O60902 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.12□□□□□ -1.59
SHOX2O60902 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.12□□□□□ -1.59
SHOX2O60902 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.12□□□□□ -1.59
SHOX2O60902 AP000547.1-201ENST00000454360 617 ntBASIC5.12□□□□□ -1.59
SHOX2O60902 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.12□□□□□ -1.59
SHOX2O60902 AC008638.1-201ENST00000506035 866 ntBASIC5.12□□□□□ -1.59
SHOX2O60902 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.12□□□□□ -1.59
SHOX2O60902 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.12□□□□□ -1.59
SHOX2O60902 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.12□□□□□ -1.59
SHOX2O60902 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.12□□□□□ -1.59
SHOX2O60902 NDUFB4P11-201ENST00000560510 395 ntBASIC5.12□□□□□ -1.59
SHOX2O60902 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.12□□□□□ -1.59
SHOX2O60902 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.12□□□□□ -1.59
SHOX2O60902 ATP5J2P6-201ENST00000565203 266 ntBASIC5.12□□□□□ -1.59
SHOX2O60902 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.12□□□□□ -1.59
SHOX2O60902 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.12□□□□□ -1.59
SHOX2O60902 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.12□□□□□ -1.59
SHOX2O60902 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.12□□□□□ -1.59
SHOX2O60902 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHOX2O60902 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.12□□□□□ -1.59
SHOX2O60902 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHOX2O60902 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHOX2O60902 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.12□□□□□ -1.59
SHOX2O60902 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHOX2O60902 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHOX2O60902 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHOX2O60902 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHOX2O60902 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHOX2O60902 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHOX2O60902 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHOX2O60902 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHOX2O60902 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SHOX2O60902 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHOX2O60902 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHOX2O60902 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHOX2O60902 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SHOX2O60902 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHOX2O60902 RNU1-150P-201ENST00000362491 162 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 RNU1-146P-201ENST00000364015 165 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
SHOX2O60902 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHOX2O60902 HDGFP1-201ENST00000405943 252 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 MIR1203-201ENST00000408812 85 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 CEACAMP8-201ENST00000413902 580 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 SLC35E1P1-201ENST00000419313 864 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 AC092017.2-201ENST00000427600 362 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.11□□□□□ -1.59
SHOX2O60902 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.11□□□□□ -1.59
SHOX2O60902 MORF4L1P4-201ENST00000450245 976 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.11□□□□□ -1.59
SHOX2O60902 RPS17P2-201ENST00000461663 408 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 AC026348.1-201ENST00000462549 1053 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 RPS23P6-201ENST00000466136 431 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 RN7SL860P-201ENST00000473738 223 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 AC020779.1-201ENST00000478757 796 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 SUMO2P4-201ENST00000504193 276 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.11□□□□□ -1.59
SHOX2O60902 HMGB1P44-201ENST00000508597 572 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.11□□□□□ -1.59
SHOX2O60902 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.11□□□□□ -1.59
SHOX2O60902 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.11□□□□□ -1.59
SHOX2O60902 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.11□□□□□ -1.59
SHOX2O60902 AC079075.1-201ENST00000559543 878 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 LINC00556-201ENST00000569603 412 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.11□□□□□ -1.59
SHOX2O60902 AC015802.2-201ENST00000589690 189 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 AC005252.1-201ENST00000604518 1063 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 AC234782.5-201ENST00000617723 324 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 AC009237.17-201ENST00000618111 748 ntBASIC5.11□□□□□ -1.59
SHOX2O60902 AC025262.3-201ENST00000623666 360 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms