Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC28A1O00337 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC28A1O00337 RLIMP2-201ENST00000427891 1563 ntBASIC5.07□□□□□ -1.6
SLC28A1O00337 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SLC28A1O00337 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC28A1O00337 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SLC28A1O00337 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SLC28A1O00337 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SLC28A1O00337 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SLC28A1O00337 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC28A1O00337 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC28A1O00337 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.06□□□□□ -1.6
SLC28A1O00337 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SLC28A1O00337 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.06□□□□□ -1.6
SLC28A1O00337 AP005432.1-201ENST00000580891 3485 ntBASIC5.06□□□□□ -1.6
SLC28A1O00337 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC28A1O00337 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SLC28A1O00337 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SLC28A1O00337 AC073136.1-201ENST00000449426 2884 ntBASIC5.06□□□□□ -1.6
SLC28A1O00337 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.06□□□□□ -1.6
SLC28A1O00337 MIR105-1-201ENST00000385222 81 ntBASIC5.06□□□□□ -1.6
SLC28A1O00337 OR8V1P-201ENST00000395193 873 ntBASIC5.06□□□□□ -1.6
SLC28A1O00337 ST13P16-201ENST00000401760 781 ntBASIC5.06□□□□□ -1.6
SLC28A1O00337 RPL10P10-201ENST00000403509 664 ntBASIC5.06□□□□□ -1.6
SLC28A1O00337 NAP1L4P2-201ENST00000425958 899 ntBASIC5.06□□□□□ -1.6
SLC28A1O00337 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC28A1O00337 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC28A1O00337 RPL36AP39-201ENST00000445859 318 ntBASIC5.06□□□□□ -1.6
SLC28A1O00337 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.06□□□□□ -1.6
SLC28A1O00337 AC104629.2-201ENST00000468627 598 ntBASIC5.06□□□□□ -1.6
SLC28A1O00337 AC007998.1-201ENST00000474156 672 ntBASIC5.06□□□□□ -1.6
SLC28A1O00337 RNU6-513P-201ENST00000516104 104 ntBASIC5.06□□□□□ -1.6
SLC28A1O00337 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC28A1O00337 AC112191.2-201ENST00000522428 333 ntBASIC5.06□□□□□ -1.6
SLC28A1O00337 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC28A1O00337 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.06□□□□□ -1.6
SLC28A1O00337 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC28A1O00337 LSM3P2-201ENST00000551246 273 ntBASIC5.06□□□□□ -1.6
SLC28A1O00337 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.06□□□□□ -1.6
SLC28A1O00337 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.06□□□□□ -1.6
SLC28A1O00337 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC28A1O00337 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SLC28A1O00337 AC005726.4-201ENST00000582858 458 ntBASIC5.06□□□□□ -1.6
SLC28A1O00337 AC027243.2-201ENST00000602530 724 ntBASIC5.06□□□□□ -1.6
SLC28A1O00337 FO393422.1-201ENST00000603908 708 ntBASIC5.06□□□□□ -1.6
SLC28A1O00337 HMGB1P51-201ENST00000605166 638 ntBASIC5.06□□□□□ -1.6
SLC28A1O00337 AC007620.3-201ENST00000608131 497 ntBASIC5.06□□□□□ -1.6
SLC28A1O00337 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.06□□□□□ -1.6
SLC28A1O00337 AC103703.1-201ENST00000634783 663 ntBASIC5.06□□□□□ -1.6
SLC28A1O00337 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.06□□□□□ -1.6
SLC28A1O00337 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SLC28A1O00337 MTCO1P15-201ENST00000529569 1526 ntBASIC5.06□□□□□ -1.6
SLC28A1O00337 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC28A1O00337 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC28A1O00337 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SLC28A1O00337 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SLC28A1O00337 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SLC28A1O00337 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SLC28A1O00337 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SLC28A1O00337 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SLC28A1O00337 AC107977.1-201ENST00000355745 939 ntBASIC5.05□□□□□ -1.6
SLC28A1O00337 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
SLC28A1O00337 RNA5SP510-201ENST00000364697 99 ntBASIC5.05□□□□□ -1.6
SLC28A1O00337 RNU1-74P-201ENST00000384108 171 ntBASIC5.05□□□□□ -1.6
SLC28A1O00337 SNORD65-201ENST00000391079 73 ntBASIC5.05□□□□□ -1.6
SLC28A1O00337 OR4K12P-201ENST00000406538 961 ntBASIC5.05□□□□□ -1.6
SLC28A1O00337 GABARAPL3-201ENST00000412799 354 ntBASIC5.05□□□□□ -1.6
SLC28A1O00337 AC007738.1-201ENST00000413892 348 ntBASIC5.05□□□□□ -1.6
SLC28A1O00337 NDUFA5P1-201ENST00000433858 341 ntBASIC5.05□□□□□ -1.6
SLC28A1O00337 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.05□□□□□ -1.6
SLC28A1O00337 RPL23AP19-201ENST00000436229 369 ntBASIC5.05□□□□□ -1.6
SLC28A1O00337 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC28A1O00337 AC104634.1-201ENST00000452720 462 ntBASIC5.05□□□□□ -1.6
SLC28A1O00337 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.05□□□□□ -1.6
SLC28A1O00337 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC28A1O00337 AC084754.1-201ENST00000463466 464 ntBASIC5.05□□□□□ -1.6
SLC28A1O00337 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SLC28A1O00337 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SLC28A1O00337 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC28A1O00337 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC28A1O00337 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC28A1O00337 AC022826.1-201ENST00000519383 805 ntBASIC5.05□□□□□ -1.6
SLC28A1O00337 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC28A1O00337 AP000859.1-201ENST00000525536 307 ntBASIC5.05□□□□□ -1.6
SLC28A1O00337 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC28A1O00337 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC28A1O00337 AC067805.1-201ENST00000559344 470 ntBASIC5.05□□□□□ -1.6
SLC28A1O00337 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC28A1O00337 AC010245.2-201ENST00000606908 1167 ntBASIC5.05□□□□□ -1.6
SLC28A1O00337 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC28A1O00337 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC28A1O00337 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC28A1O00337 AL691477.1-201ENST00000624398 162 ntBASIC5.05□□□□□ -1.6
SLC28A1O00337 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SLC28A1O00337 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
SLC28A1O00337 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
SLC28A1O00337 TCP1P3-201ENST00000414406 1498 ntBASIC5.05□□□□□ -1.6
SLC28A1O00337 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SLC28A1O00337 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SLC28A1O00337 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms