Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 RPS29P22-201ENST00000472363 168 ntBASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 MYL12BP2-201ENST00000503948 512 ntBASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 RN7SKP147-201ENST00000517154 244 ntBASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 BRD9P1-201ENST00000529855 560 ntBASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 CR383656.6-201ENST00000550518 394 ntBASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 MIR4436B2-201ENST00000581415 91 ntBASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 MIR4472-2-201ENST00000582069 67 ntBASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 MIR4436B1-201ENST00000583272 91 ntBASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL139124.1-201ENST00000609123 421 ntBASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL445528.2-201ENST00000620582 470 ntBASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 uc_338.7-201ENST00000621834 124 ntBASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL078621.3-201ENST00000623707 2042 ntBASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC019072.1-201ENST00000604535 1551 ntBASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 SNORA16A-201ENST00000384342 137 ntBASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 MIR600-201ENST00000385007 98 ntBASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 MIR105-1-201ENST00000385222 81 ntBASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 RNA5SP241-201ENST00000391326 114 ntBASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 NUDT19P3-201ENST00000404698 555 ntBASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 Y_RNA.625-201ENST00000411256 107 ntBASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 RPS26P13-201ENST00000419030 330 ntBASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 RBMY2QP-201ENST00000429799 1147 ntBASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 PSMD10P3-201ENST00000437000 448 ntBASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 PRPF38AP1-201ENST00000451976 933 ntBASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC021660.1-201ENST00000465006 554 ntBASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC009127.1-201ENST00000467090 155 ntBASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC090142.2-201ENST00000483263 416 ntBASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 RN7SKP260-201ENST00000516907 149 ntBASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC012400.1-201ENST00000518452 381 ntBASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 RN7SL356P-201ENST00000582228 248 ntBASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC010435.1-201ENST00000623353 1177 ntBASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.12□□□□□ -1.59
TMX2-CTNND1H3BSU7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL672167.1-204ENST00000641875 3017 ntBASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC092681.1-201ENST00000297369 291 ntBASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL078599.1-201ENST00000402075 293 ntBASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC079168.1-201ENST00000458741 345 ntBASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC097484.1-201ENST00000471148 389 ntBASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 RN7SL423P-201ENST00000486202 304 ntBASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC004980.4-201ENST00000513375 203 ntBASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 AP004607.2-201ENST00000533949 322 ntBASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC040958.1-201ENST00000561102 201 ntBASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 PRPF19P1-201ENST00000584766 898 ntBASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC009237.13-201ENST00000603193 276 ntBASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC091905.4-201ENST00000623432 202 ntBASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC016542.2-201ENST00000624201 619 ntBASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.11□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC135068.12-201ENST00000637370 931 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms