Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHISA3A0PJX4 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
SHISA3A0PJX4 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
SHISA3A0PJX4 AC003973.3-201ENST00000624863 2822 ntBASIC6.01□□□□□ -1.45
SHISA3A0PJX4 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHISA3A0PJX4 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHISA3A0PJX4 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHISA3A0PJX4 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHISA3A0PJX4 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
SHISA3A0PJX4 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.01□□□□□ -1.45
SHISA3A0PJX4 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHISA3A0PJX4 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
SHISA3A0PJX4 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHISA3A0PJX4 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SHISA3A0PJX4 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6□□□□□ -1.45
SHISA3A0PJX4 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6□□□□□ -1.45
SHISA3A0PJX4 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
SHISA3A0PJX4 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6□□□□□ -1.45
SHISA3A0PJX4 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHISA3A0PJX4 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHISA3A0PJX4 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHISA3A0PJX4 MTND5P17-201ENST00000418405 1603 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 UGT2B26P-201ENST00000508672 1613 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6□□□□□ -1.45
SHISA3A0PJX4 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SHISA3A0PJX4 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHISA3A0PJX4 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHISA3A0PJX4 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHISA3A0PJX4 SNORA73B-201ENST00000363217 204 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 SUGT1P1-201ENST00000379514 476 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 RNU6-297P-201ENST00000384636 107 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6□□□□□ -1.45
SHISA3A0PJX4 FCF1P10-201ENST00000407590 479 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 MTND4LP17-201ENST00000414607 293 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 AC062016.2-201ENST00000420950 676 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 AL513175.1-201ENST00000431492 780 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 OSTCP2-201ENST00000437956 444 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 AC027124.1-201ENST00000440852 466 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 CYCSP44-201ENST00000448560 313 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHISA3A0PJX4 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHISA3A0PJX4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC6□□□□□ -1.45
SHISA3A0PJX4 AC013429.1-201ENST00000456604 422 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 snoU109.1-201ENST00000459339 135 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 AL928654.1-201ENST00000476081 354 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC6□□□□□ -1.45
SHISA3A0PJX4 RN7SL306P-201ENST00000492941 296 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC6□□□□□ -1.45
SHISA3A0PJX4 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SHISA3A0PJX4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6□□□□□ -1.45
SHISA3A0PJX4 DUTP7-201ENST00000507982 486 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 STMN1P2-201ENST00000508435 439 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 AC048346.1-201ENST00000510247 144 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 PTGES3P3-201ENST00000511479 482 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 MTCYBP43-201ENST00000513621 740 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 MTCO1P30-201ENST00000515244 580 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 RNA5SP216-201ENST00000516111 123 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6□□□□□ -1.45
SHISA3A0PJX4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC6□□□□□ -1.45
SHISA3A0PJX4 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6□□□□□ -1.45
SHISA3A0PJX4 DPPA3P2-202ENST00000557188 1219 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC6□□□□□ -1.45
SHISA3A0PJX4 MED31-202ENST00000574128 619 ntTSL 3 BASIC6□□□□□ -1.45
SHISA3A0PJX4 KPNA2P3-201ENST00000584190 848 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6□□□□□ -1.45
SHISA3A0PJX4 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC6□□□□□ -1.45
SHISA3A0PJX4 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6□□□□□ -1.45
SHISA3A0PJX4 AC025449.1-201ENST00000603896 529 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 AC087045.1-201ENST00000605856 382 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 AL354760.1-201ENST00000608357 643 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6□□□□□ -1.45
SHISA3A0PJX4 AC103710.1-201ENST00000610003 901 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6□□□□□ -1.45
SHISA3A0PJX4 AC108479.2-201ENST00000617314 601 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 AC079228.1-201ENST00000624774 1049 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC6□□□□□ -1.45
SHISA3A0PJX4 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6□□□□□ -1.45
SHISA3A0PJX4 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SHISA3A0PJX4 AC131971.1-201ENST00000332881 1482 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6□□□□□ -1.45
SHISA3A0PJX4 AC022306.1-201ENST00000560489 1562 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHISA3A0PJX4 MTND5P23-201ENST00000430812 1655 ntBASIC6□□□□□ -1.45
SHISA3A0PJX4 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHISA3A0PJX4 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SHISA3A0PJX4 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHISA3A0PJX4 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6□□□□□ -1.45
SHISA3A0PJX4 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHISA3A0PJX4 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SHISA3A0PJX4 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6□□□□□ -1.45
SHISA3A0PJX4 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC6□□□□□ -1.45
SHISA3A0PJX4 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SHISA3A0PJX4 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SHISA3A0PJX4 RPS4XP5-202ENST00000449995 1334 ntBASIC5.99□□□□□ -1.45
SHISA3A0PJX4 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.99□□□□□ -1.45
SHISA3A0PJX4 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHISA3A0PJX4 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.99□□□□□ -1.45
SHISA3A0PJX4 LINC00561-201ENST00000565815 2738 ntBASIC5.99□□□□□ -1.45
SHISA3A0PJX4 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SHISA3A0PJX4 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms