Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AK4P6-201ENST00000505168 528 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC027369.5-201ENST00000533838 755 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 OR8K4P-201ENST00000534608 872 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 BLZF2P-201ENST00000553776 1130 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC008521.2-201ENST00000591021 259 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AP001160.4-201ENST00000596971 382 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AP003400.3-201ENST00000624904 346 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC099654.6-201ENST00000636487 512 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 MTCO1P15-201ENST00000529569 1526 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AL078621.3-201ENST00000623707 2042 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 RNU4-40P-201ENST00000364351 143 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 RN7SKP124-201ENST00000364730 341 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 TAS2R15P-201ENST00000390674 928 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 RNA5SP241-201ENST00000391326 114 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 RN7SKP286-201ENST00000410894 299 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 PTP4A1P7-201ENST00000423476 514 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AC245517.2-201ENST00000442890 346 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AC096992.1-201ENST00000459808 709 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AC008379.1-201ENST00000463655 464 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AC092754.1-201ENST00000472975 479 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AC010627.1-201ENST00000503819 1294 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 SUMO2P5-201ENST00000506790 245 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AC119751.5-201ENST00000514077 770 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AC010476.1-201ENST00000519111 851 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AC112191.2-201ENST00000522428 333 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 DUXAP5-201ENST00000529668 529 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AC023538.1-201ENST00000534576 736 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AC027544.3-201ENST00000535082 757 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 EIF1P5-201ENST00000585002 234 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 QTRT1P1-201ENST00000604344 1078 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AC010245.2-201ENST00000606908 1167 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 CYCSP41-201ENST00000616920 296 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AC126175.1-201ENST00000617041 758 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 AC019226.2-201ENST00000625973 424 ntBASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms