Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 RN7SKP28-201ENST00000364770 305 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 RPL12P9-201ENST00000412942 488 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AL596448.1-201ENST00000415024 392 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AL034379.1-201ENST00000423216 253 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 BX119904.1-201ENST00000432026 348 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AL445665.1-202ENST00000452436 324 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC021146.7-201ENST00000509604 775 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC016559.2-201ENST00000510759 359 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 TOMM20P1-201ENST00000534518 427 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 IGBP1P1-201ENST00000554337 1009 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 MTCYBP13-201ENST00000578634 1093 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 EIF1P5-201ENST00000585002 234 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC091057.3-201ENST00000602684 733 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC023762.1-201ENST00000603280 584 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC004241.3-201ENST00000611728 517 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC008115.3-201ENST00000614874 549 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC073342.3-201ENST00000624211 193 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC099654.9-201ENST00000637055 678 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC099654.8-201ENST00000637757 681 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 OR13C1P-202ENST00000641378 2919 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 LINC01963-201ENST00000562038 3148 ntBASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TCRBV7S3A2A0A539 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AP005435.3-201ENST00000531260 3198 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 DDX18P6-201ENST00000450119 1997 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 MIR16-2-201ENST00000362117 81 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AL391422.1-201ENST00000402155 436 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 OR4K12P-201ENST00000406538 961 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 GAPDHP42-201ENST00000406848 981 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 VN1R51P-201ENST00000411675 945 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 SLC20A1P1-201ENST00000413906 956 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 OR6E1P-201ENST00000414424 923 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AC073310.1-201ENST00000423226 1033 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 MTCO2P17-201ENST00000424336 677 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 Z84478.1-201ENST00000438230 1219 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 RPL7P33-201ENST00000444159 742 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 AC016772.1-201ENST00000444170 1261 ntBASIC5.48□□□□□ -1.53
TCRBV7S3A2A0A539 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms