Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 AC098483.2-201ENST00000603158 454 ntBASIC5.52□□□□□ -1.53
PCDH9Q9HC56 AC002069.2-201ENST00000603580 883 ntBASIC5.52□□□□□ -1.53
PCDH9Q9HC56 AL356752.1-201ENST00000615844 593 ntBASIC5.52□□□□□ -1.53
PCDH9Q9HC56 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 AC119674.1-220ENST00000641502 1048 ntBASIC5.52□□□□□ -1.53
PCDH9Q9HC56 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 AC011503.2-201ENST00000594230 1500 ntBASIC5.52□□□□□ -1.53
PCDH9Q9HC56 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 ADAM5-202ENST00000399789 1942 ntBASIC5.52□□□□□ -1.53
PCDH9Q9HC56 CDC27P2-201ENST00000425026 1922 ntBASIC5.52□□□□□ -1.53
PCDH9Q9HC56 CASC19-248ENST00000641674 1356 ntBASIC5.52□□□□□ -1.53
PCDH9Q9HC56 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.51□□□□□ -1.53
PCDH9Q9HC56 RN7SKP153-201ENST00000365026 316 ntBASIC5.51□□□□□ -1.53
PCDH9Q9HC56 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 RPL21P67-201ENST00000402896 478 ntBASIC5.51□□□□□ -1.53
PCDH9Q9HC56 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 AL512504.1-201ENST00000415494 778 ntBASIC5.51□□□□□ -1.53
PCDH9Q9HC56 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 CHEK2P5-201ENST00000423877 246 ntBASIC5.51□□□□□ -1.53
PCDH9Q9HC56 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 MTND2P25-201ENST00000449028 610 ntBASIC5.51□□□□□ -1.53
PCDH9Q9HC56 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 AC021660.1-201ENST00000465006 554 ntBASIC5.51□□□□□ -1.53
PCDH9Q9HC56 AC100832.1-201ENST00000471945 383 ntBASIC5.51□□□□□ -1.53
PCDH9Q9HC56 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 AC022133.1-201ENST00000490961 571 ntBASIC5.51□□□□□ -1.53
PCDH9Q9HC56 OR9N1P-201ENST00000491296 333 ntBASIC5.51□□□□□ -1.53
PCDH9Q9HC56 EIF3LP3-201ENST00000495197 822 ntBASIC5.51□□□□□ -1.53
PCDH9Q9HC56 RN7SL101P-201ENST00000496350 279 ntBASIC5.51□□□□□ -1.53
PCDH9Q9HC56 AL136038.1-201ENST00000497246 351 ntBASIC5.51□□□□□ -1.53
PCDH9Q9HC56 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 SCARNA16.4-201ENST00000516956 187 ntBASIC5.51□□□□□ -1.53
PCDH9Q9HC56 OR10D4P-201ENST00000525892 951 ntBASIC5.51□□□□□ -1.53
PCDH9Q9HC56 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 AC011445.2-201ENST00000599274 173 ntBASIC5.51□□□□□ -1.53
PCDH9Q9HC56 AC024933.1-201ENST00000608472 348 ntBASIC5.51□□□□□ -1.53
PCDH9Q9HC56 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 MIR8080-201ENST00000622224 89 ntBASIC5.51□□□□□ -1.53
PCDH9Q9HC56 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDH9Q9HC56 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AL034549.2-201ENST00000618285 3373 ntBASIC5.5□□□□□ -1.53
PCDH9Q9HC56 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AL353796.1-201ENST00000561542 3241 ntBASIC5.5□□□□□ -1.53
PCDH9Q9HC56 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 SNORA16A-201ENST00000384342 137 ntBASIC5.5□□□□□ -1.53
PCDH9Q9HC56 MIR143-201ENST00000385300 106 ntBASIC5.5□□□□□ -1.53
PCDH9Q9HC56 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AC096644.3-201ENST00000416788 338 ntBASIC5.5□□□□□ -1.53
PCDH9Q9HC56 ARAFP1-201ENST00000422172 605 ntBASIC5.5□□□□□ -1.53
PCDH9Q9HC56 PRUNEP1-201ENST00000425846 705 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms