Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
UPF2Q9HAU5 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.21□□□□□ -1.42
UPF2Q9HAU5 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 OR13C1P-202ENST00000641378 2919 ntBASIC6.2□□□□□ -1.42
UPF2Q9HAU5 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 SLC20A1P1-201ENST00000413906 956 ntBASIC6.2□□□□□ -1.42
UPF2Q9HAU5 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 TMBIM7P-201ENST00000418074 855 ntBASIC6.2□□□□□ -1.42
UPF2Q9HAU5 OR6C64P-201ENST00000419708 825 ntBASIC6.2□□□□□ -1.42
UPF2Q9HAU5 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 HNRNPRP2-201ENST00000528421 743 ntBASIC6.2□□□□□ -1.42
UPF2Q9HAU5 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 AL512310.9-201ENST00000553311 948 ntBASIC6.2□□□□□ -1.42
UPF2Q9HAU5 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 AC010547.6-201ENST00000571789 193 ntBASIC6.2□□□□□ -1.42
UPF2Q9HAU5 AP005901.4-201ENST00000577336 569 ntBASIC6.2□□□□□ -1.42
UPF2Q9HAU5 AL138895.2-201ENST00000603019 178 ntBASIC6.2□□□□□ -1.42
UPF2Q9HAU5 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 AC010809.3-201ENST00000621310 641 ntBASIC6.2□□□□□ -1.42
UPF2Q9HAU5 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
UPF2Q9HAU5 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
UPF2Q9HAU5 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
UPF2Q9HAU5 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
UPF2Q9HAU5 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
UPF2Q9HAU5 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
UPF2Q9HAU5 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC6.19□□□□□ -1.42
UPF2Q9HAU5 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
UPF2Q9HAU5 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
UPF2Q9HAU5 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.19□□□□□ -1.42
UPF2Q9HAU5 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.19□□□□□ -1.42
UPF2Q9HAU5 OOSP1-201ENST00000398992 1270 ntBASIC6.19□□□□□ -1.42
UPF2Q9HAU5 AC099535.1-201ENST00000408928 371 ntBASIC6.19□□□□□ -1.42
UPF2Q9HAU5 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.19□□□□□ -1.42
UPF2Q9HAU5 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.19□□□□□ -1.42
UPF2Q9HAU5 AC002504.1-201ENST00000438281 691 ntBASIC6.19□□□□□ -1.42
UPF2Q9HAU5 RN7SL443P-201ENST00000464331 290 ntBASIC6.19□□□□□ -1.42
UPF2Q9HAU5 RPL5P22-201ENST00000480199 884 ntBASIC6.19□□□□□ -1.42
UPF2Q9HAU5 RN7SL741P-201ENST00000482473 289 ntBASIC6.19□□□□□ -1.42
UPF2Q9HAU5 AC020890.1-201ENST00000491837 504 ntBASIC6.19□□□□□ -1.42
UPF2Q9HAU5 TOMM20P1-201ENST00000534518 427 ntBASIC6.19□□□□□ -1.42
UPF2Q9HAU5 AC107958.1-201ENST00000556576 290 ntBASIC6.19□□□□□ -1.42
UPF2Q9HAU5 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.19□□□□□ -1.42
UPF2Q9HAU5 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.19□□□□□ -1.42
UPF2Q9HAU5 MIR4505-201ENST00000582238 73 ntBASIC6.19□□□□□ -1.42
UPF2Q9HAU5 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
UPF2Q9HAU5 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC6.19□□□□□ -1.42
UPF2Q9HAU5 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
UPF2Q9HAU5 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.19□□□□□ -1.42
UPF2Q9HAU5 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
UPF2Q9HAU5 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.18□□□□□ -1.42
UPF2Q9HAU5 U3.3-201ENST00000362986 216 ntBASIC6.18□□□□□ -1.42
UPF2Q9HAU5 RNA5SP335-201ENST00000363817 110 ntBASIC6.18□□□□□ -1.42
UPF2Q9HAU5 VN1R12P-201ENST00000403778 876 ntBASIC6.18□□□□□ -1.42
UPF2Q9HAU5 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.18□□□□□ -1.42
UPF2Q9HAU5 RN7SKP286-201ENST00000410894 299 ntBASIC6.18□□□□□ -1.42
UPF2Q9HAU5 RN7SKP97-201ENST00000410966 333 ntBASIC6.18□□□□□ -1.42
UPF2Q9HAU5 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.18□□□□□ -1.42
UPF2Q9HAU5 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.18□□□□□ -1.42
UPF2Q9HAU5 RNA5SP373-201ENST00000517271 95 ntBASIC6.18□□□□□ -1.42
UPF2Q9HAU5 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.18□□□□□ -1.42
UPF2Q9HAU5 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.18□□□□□ -1.42
UPF2Q9HAU5 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.18□□□□□ -1.42
UPF2Q9HAU5 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.18□□□□□ -1.42
UPF2Q9HAU5 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.18□□□□□ -1.42
UPF2Q9HAU5 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.18□□□□□ -1.42
UPF2Q9HAU5 AC084033.1-201ENST00000550830 633 ntBASIC6.18□□□□□ -1.42
UPF2Q9HAU5 RPL10P14-201ENST00000565265 298 ntBASIC6.18□□□□□ -1.42
UPF2Q9HAU5 CYCSP40-201ENST00000575927 294 ntBASIC6.18□□□□□ -1.42
UPF2Q9HAU5 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.18□□□□□ -1.42
UPF2Q9HAU5 AC097505.1-201ENST00000610199 565 ntBASIC6.18□□□□□ -1.42
UPF2Q9HAU5 WBP1LP8-201ENST00000617401 327 ntBASIC6.18□□□□□ -1.42
UPF2Q9HAU5 AC068446.1-201ENST00000556425 1549 ntBASIC6.18□□□□□ -1.42
UPF2Q9HAU5 AL132656.3-201ENST00000606384 1595 ntBASIC6.18□□□□□ -1.42
UPF2Q9HAU5 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
UPF2Q9HAU5 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
UPF2Q9HAU5 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms