Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AP000648.2-201ENST00000624182 404 ntBASIC5.32□□□□□ -1.56
C9orf72Q96LT7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
C9orf72Q96LT7 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.32□□□□□ -1.56
C9orf72Q96LT7 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
C9orf72Q96LT7 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.32□□□□□ -1.56
C9orf72Q96LT7 C4BPAP1-201ENST00000415474 1893 ntBASIC5.32□□□□□ -1.56
C9orf72Q96LT7 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
C9orf72Q96LT7 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
C9orf72Q96LT7 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
C9orf72Q96LT7 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.32□□□□□ -1.56
C9orf72Q96LT7 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
C9orf72Q96LT7 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 AL138820.1-201ENST00000617901 5305 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 RNA5SP335-201ENST00000363817 110 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 U3.32-201ENST00000408116 212 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 AL390774.1-201ENST00000411924 246 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 CBX1P3-201ENST00000413296 527 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 AL133325.1-201ENST00000421090 382 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 RN7SL172P-201ENST00000460535 303 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 RPS4XP1-201ENST00000482189 787 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 RN7SL447P-201ENST00000494711 245 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 AC006499.3-201ENST00000506077 748 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 PGAM1P13-201ENST00000507497 754 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 RNA5SP92-201ENST00000516437 110 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 AC126177.5-201ENST00000549599 178 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 BLZF2P-201ENST00000553776 1130 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 RBM22P1-201ENST00000578589 1214 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 AC060766.1-201ENST00000590824 627 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 AC008814.1-201ENST00000603797 406 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 AC108359.1-201ENST00000616451 1211 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 AC016769.4-201ENST00000616893 535 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 WBP1LP8-201ENST00000617401 327 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 AC010809.3-201ENST00000621310 641 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 AC000374.1-201ENST00000434698 1745 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 AC025574.1-201ENST00000554784 1653 ntBASIC5.31□□□□□ -1.56
C9orf72Q96LT7 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.31□□□□□ -1.56
C9orf72Q96LT7 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 AC017079.1-201ENST00000333650 415 ntBASIC5.3□□□□□ -1.56
C9orf72Q96LT7 MIR223-201ENST00000385204 110 ntBASIC5.3□□□□□ -1.56
C9orf72Q96LT7 AL035079.1-201ENST00000405210 287 ntBASIC5.3□□□□□ -1.56
C9orf72Q96LT7 SPTLC1P2-201ENST00000407089 121 ntBASIC5.3□□□□□ -1.56
C9orf72Q96LT7 AC016769.2-201ENST00000414815 475 ntBASIC5.3□□□□□ -1.56
C9orf72Q96LT7 NANOGP4-201ENST00000427230 913 ntBASIC5.3□□□□□ -1.56
C9orf72Q96LT7 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 RPL7AP61-201ENST00000443410 636 ntBASIC5.3□□□□□ -1.56
C9orf72Q96LT7 RPS26P41-201ENST00000450370 284 ntBASIC5.3□□□□□ -1.56
C9orf72Q96LT7 RN7SL515P-201ENST00000463999 297 ntBASIC5.3□□□□□ -1.56
C9orf72Q96LT7 RN7SL727P-201ENST00000482164 296 ntBASIC5.3□□□□□ -1.56
C9orf72Q96LT7 RPS21P4-201ENST00000487122 248 ntBASIC5.3□□□□□ -1.56
C9orf72Q96LT7 HIGD1AP14-201ENST00000507617 282 ntBASIC5.3□□□□□ -1.56
C9orf72Q96LT7 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 AC006427.1-201ENST00000514359 712 ntBASIC5.3□□□□□ -1.56
C9orf72Q96LT7 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 AC007066.2-202ENST00000566531 914 ntBASIC5.3□□□□□ -1.56
C9orf72Q96LT7 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 AC037198.3-201ENST00000616754 526 ntBASIC5.3□□□□□ -1.56
C9orf72Q96LT7 BX005214.3-202ENST00000619809 325 ntBASIC5.3□□□□□ -1.56
C9orf72Q96LT7 AC018445.2-201ENST00000622987 260 ntBASIC5.3□□□□□ -1.56
C9orf72Q96LT7 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 AL022393.1-201ENST00000625142 1677 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms