Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.3□□□□□ -1.4
HPS3Q969F9 RN7SKP17-201ENST00000411242 351 ntBASIC6.3□□□□□ -1.4
HPS3Q969F9 AL445183.3-201ENST00000414168 502 ntBASIC6.3□□□□□ -1.4
HPS3Q969F9 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.3□□□□□ -1.4
HPS3Q969F9 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.3□□□□□ -1.4
HPS3Q969F9 MTCO2P23-201ENST00000425216 680 ntBASIC6.3□□□□□ -1.4
HPS3Q969F9 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.3□□□□□ -1.4
HPS3Q969F9 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.3□□□□□ -1.4
HPS3Q969F9 RPL21P18-201ENST00000469899 480 ntBASIC6.3□□□□□ -1.4
HPS3Q969F9 AC107398.1-201ENST00000486904 505 ntBASIC6.3□□□□□ -1.4
HPS3Q969F9 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.3□□□□□ -1.4
HPS3Q969F9 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.3□□□□□ -1.4
HPS3Q969F9 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.3□□□□□ -1.4
HPS3Q969F9 MTND2P32-201ENST00000521584 1038 ntBASIC6.3□□□□□ -1.4
HPS3Q969F9 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.3□□□□□ -1.4
HPS3Q969F9 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.3□□□□□ -1.4
HPS3Q969F9 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.3□□□□□ -1.4
HPS3Q969F9 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.3□□□□□ -1.4
HPS3Q969F9 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.3□□□□□ -1.4
HPS3Q969F9 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.3□□□□□ -1.4
HPS3Q969F9 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.3□□□□□ -1.4
HPS3Q969F9 ZNF322P1-201ENST00000568013 1209 ntBASIC6.3□□□□□ -1.4
HPS3Q969F9 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.3□□□□□ -1.4
HPS3Q969F9 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.3□□□□□ -1.4
HPS3Q969F9 COX6CP7-201ENST00000597056 208 ntBASIC6.3□□□□□ -1.4
HPS3Q969F9 AC063977.5-201ENST00000601044 974 ntBASIC6.3□□□□□ -1.4
HPS3Q969F9 AL360012.1-201ENST00000602813 131 ntBASIC6.3□□□□□ -1.4
HPS3Q969F9 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC6.3□□□□□ -1.4
HPS3Q969F9 MIR6862-1-201ENST00000613016 70 ntBASIC6.3□□□□□ -1.4
HPS3Q969F9 MIR6862-2-201ENST00000614755 70 ntBASIC6.3□□□□□ -1.4
HPS3Q969F9 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HPS3Q969F9 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HPS3Q969F9 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HPS3Q969F9 AC097520.1-201ENST00000624435 385 ntBASIC6.3□□□□□ -1.4
HPS3Q969F9 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC6.3□□□□□ -1.4
HPS3Q969F9 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HPS3Q969F9 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HPS3Q969F9 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HPS3Q969F9 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HPS3Q969F9 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HPS3Q969F9 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
HPS3Q969F9 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.3□□□□□ -1.4
HPS3Q969F9 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.3□□□□□ -1.4
HPS3Q969F9 AP002512.4-202ENST00000641599 4530 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 AL591135.1-201ENST00000401578 5914 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 AC018809.2-201ENST00000602436 3823 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 AC092451.3-201ENST00000625067 1343 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 MFSD8-213ENST00000641134 1327 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.29□□□□□ -1.4
HPS3Q969F9 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
HPS3Q969F9 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.29□□□□□ -1.4
HPS3Q969F9 AC107021.2-201ENST00000567714 2095 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.29□□□□□ -1.4
HPS3Q969F9 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HPS3Q969F9 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HPS3Q969F9 RNU5E-10P-201ENST00000363506 118 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 RNU5B-4P-201ENST00000363508 111 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 SNORD56.4-201ENST00000363883 71 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HPS3Q969F9 RNU6-1005P-201ENST00000384519 107 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 U3.23-201ENST00000391132 200 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 AC005042.1-201ENST00000393397 800 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 AC005522.1-201ENST00000395416 346 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 ATP5HP3-201ENST00000396994 486 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 EIF4A1P1-201ENST00000420241 934 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 HSPE1P16-201ENST00000426640 348 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 PPIAP20-201ENST00000449839 135 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.29□□□□□ -1.4
HPS3Q969F9 AC011476.1-201ENST00000466725 307 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.29□□□□□ -1.4
HPS3Q969F9 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HPS3Q969F9 AC096571.1-202ENST00000506634 735 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HPS3Q969F9 RNA5SP271-201ENST00000516700 88 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
HPS3Q969F9 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.29□□□□□ -1.4
HPS3Q969F9 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.29□□□□□ -1.4
HPS3Q969F9 AGGF1P7-201ENST00000562369 913 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.29□□□□□ -1.4
HPS3Q969F9 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.29□□□□□ -1.4
HPS3Q969F9 AC012557.1-201ENST00000607115 611 ntBASIC6.29□□□□□ -1.4
HPS3Q969F9 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HPS3Q969F9 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.29□□□□□ -1.4
HPS3Q969F9 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HPS3Q969F9 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC6.29□□□□□ -1.4
HPS3Q969F9 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.29□□□□□ -1.4
HPS3Q969F9 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HPS3Q969F9 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.29□□□□□ -1.4
HPS3Q969F9 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HPS3Q969F9 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HPS3Q969F9 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HPS3Q969F9 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HPS3Q969F9 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HPS3Q969F9 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HPS3Q969F9 AP005435.3-201ENST00000531260 3198 ntBASIC6.28□□□□□ -1.4
HPS3Q969F9 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HPS3Q969F9 AL355488.2-201ENST00000609909 2850 ntBASIC6.28□□□□□ -1.4
HPS3Q969F9 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HPS3Q969F9 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
HPS3Q969F9 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms