Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 RNU1-134P-201ENST00000362935 165 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AC087752.1-201ENST00000391360 558 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AL096800.1-201ENST00000405326 893 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AC048351.1-201ENST00000420064 602 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 GAPDHP49-201ENST00000421421 961 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 GTF2IP23-201ENST00000423746 351 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 MTCO1P3-201ENST00000429327 192 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 COX7BP2-201ENST00000437976 242 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 TRIM60P16-201ENST00000444048 694 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 MORF4-201ENST00000447135 971 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AC074386.1-201ENST00000476560 767 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AC092865.4-201ENST00000477936 615 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AC022415.1-202ENST00000486612 523 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AC117522.2-201ENST00000510049 657 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 CR383658.1-201ENST00000514609 734 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 TMEM97P2-201ENST00000517841 403 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AL021368.3-201ENST00000607119 578 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AC005840.5-201ENST00000619166 599 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AC007490.1-201ENST00000624321 703 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 MIR1322-201ENST00000638013 71 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 MFSD8-245ENST00000641743 948 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 HSPA8P17-201ENST00000427029 1382 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AC006042.3-201ENST00000454684 1469 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AP002370.1-201ENST00000528055 1602 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 AL669831.5-218ENST00000591702 1873 ntBASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 MTND4P31-201ENST00000425607 1343 ntBASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 TMSB4XP4-201ENST00000323496 618 ntBASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 RNA5SP273-201ENST00000362484 113 ntBASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 SNORD116-8-201ENST00000384365 95 ntBASIC6.37□□□□□ -1.39
SYNPOQ8N3V7 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms