Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 RN7SKP288-201ENST00000516227 268 ntBASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 OR56A7P-201ENST00000524865 941 ntBASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 AC090424.1-201ENST00000535243 736 ntBASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 AL390334.1-201ENST00000556395 450 ntBASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 AC005242.1-201ENST00000585658 438 ntBASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 AC090236.2-201ENST00000587933 1101 ntBASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 BMS1P7-201ENST00000602440 1052 ntBASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 AC104695.2-201ENST00000605056 775 ntBASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 AP002967.1-201ENST00000624203 539 ntBASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 AC005618.4-201ENST00000625053 554 ntBASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 AC106858.1-201ENST00000637497 429 ntBASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM3Q53GG5 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 CASC19-281ENST00000642118 1554 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC083843.2-201ENST00000568248 6253 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC112198.2-201ENST00000426589 6996 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 RNA5SP375-201ENST00000362975 119 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AL645927.1-201ENST00000396783 406 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AL356967.1-201ENST00000406305 431 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC096775.1-201ENST00000437724 448 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AP000936.3-201ENST00000438127 255 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AL513321.1-201ENST00000441175 761 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC009963.2-201ENST00000453431 138 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC108751.3-201ENST00000461814 1020 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AL133445.1-201ENST00000467051 452 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC093663.2-201ENST00000484625 313 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC108693.1-201ENST00000496068 432 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 HAUS1P1-201ENST00000505275 832 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC093770.1-201ENST00000511559 571 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 BX510359.5-201ENST00000515651 304 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 OSBPL9P3-201ENST00000534523 595 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC092451.2-201ENST00000538746 658 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC027176.2-201ENST00000559166 746 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC006363.1-201ENST00000603806 463 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC096553.1-201ENST00000605169 829 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 NANOGP3-201ENST00000605855 286 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC015712.7-201ENST00000615211 635 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AL445670.1-201ENST00000618889 801 ntBASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.79□□□□□ -1.64
PDLIM3Q53GG5 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms