| NPRL3 | Q12980 | ASNSD1-208 | ENST00000607690 | 535 nt | TSL 2 BASIC | 5.07 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | MALAT1-205 | ENST00000610851 | 584 nt | TSL 2 BASIC | 5.07 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | OSER1-AS1-205 | ENST00000623343 | 827 nt | TSL 5 BASIC | 5.07 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | MIR325HG-208 | ENST00000630388 | 1043 nt | TSL 1 (best) BASIC | 5.07 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AL139254.3-201 | ENST00000641097 | 674 nt | BASIC | 5.07 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC119674.1-212 | ENST00000641155 | 993 nt | BASIC | 5.07 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | DOCK9-207 | ENST00000442173 | 7643 nt | APPRIS ALT2 TSL 5 BASIC | 5.07 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | CFH-206 | ENST00000630130 | 1658 nt | TSL 1 (best) BASIC | 5.07 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC092079.1-201 | ENST00000558620 | 1985 nt | BASIC | 5.07 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | SOCS5P3-201 | ENST00000425115 | 1576 nt | BASIC | 5.07 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | ZNF733P-202 | ENST00000444809 | 1573 nt | BASIC | 5.07 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | POLE2-206 | ENST00000554396 | 1581 nt | TSL 1 (best) BASIC | 5.07 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC092447.5-201 | ENST00000429367 | 2741 nt | TSL 1 (best) BASIC | 5.07 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | TSPAN6-204 | ENST00000612152 | 3796 nt | TSL 5 BASIC | 5.07 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | ZNF143-201 | ENST00000299606 | 2562 nt | TSL 5 BASIC | 5.07 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | PREPL-201 | ENST00000260648 | 3672 nt | APPRIS P1 TSL 1 (best) BASIC | 5.07 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC005332.5-201 | ENST00000591222 | 2919 nt | BASIC | 5.07 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC106872.5-201 | ENST00000508856 | 1416 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | RBM44-206 | ENST00000611254 | 1427 nt | TSL 2 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | FOXN2-203 | ENST00000616844 | 1414 nt | TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | TENM1-202 | ENST00000422452 | 12891 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | ZNF486-201 | ENST00000335117 | 3837 nt | APPRIS P1 TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AL445623.2-201 | ENST00000640307 | 4805 nt | TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | PATL1-201 | ENST00000300146 | 4072 nt | APPRIS P1 TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | PRKAA1-204 | ENST00000397128 | 5088 nt | APPRIS P1 TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | PLEKHS1-204 | ENST00000369310 | 2046 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | SMNDC1-202 | ENST00000369603 | 4341 nt | APPRIS P1 TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | CDH18-210 | ENST00000511273 | 2318 nt | TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC022417.1-201 | ENST00000624768 | 1303 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | IFIT1B-201 | ENST00000371809 | 1972 nt | APPRIS P1 TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | ZNF410-211 | ENST00000555044 | 2601 nt | APPRIS P1 TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | BICRAL-201 | ENST00000314073 | 6530 nt | APPRIS P1 TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | TNRC6B-201 | ENST00000301923 | 15958 nt | APPRIS P3 TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | DNA2-201 | ENST00000358410 | 4208 nt | APPRIS P1 TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | MGST1-201 | ENST00000010404 | 901 nt | APPRIS P1 TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | FAM162A-201 | ENST00000232125 | 801 nt | TSL 2 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | NUP37-201 | ENST00000251074 | 1203 nt | APPRIS P1 TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | SPRR2D-201 | ENST00000360379 | 682 nt | APPRIS P1 TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | RNU1-150P-201 | ENST00000362491 | 162 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC007618.1-201 | ENST00000366455 | 732 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | KRTAP29-1-201 | ENST00000391353 | 1026 nt | APPRIS P1 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | MGST1-203 | ENST00000396207 | 909 nt | APPRIS P1 TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | NCSTNP1-201 | ENST00000406229 | 144 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | NPM1P40-201 | ENST00000412758 | 733 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | OXSM-202 | ENST00000420173 | 1256 nt | TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | IL23R-203 | ENST00000425614 | 1295 nt | TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | HSPE1P16-201 | ENST00000426640 | 348 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | CA1-201 | ENST00000431316 | 1232 nt | APPRIS P1 TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | RPS29P14-201 | ENST00000431518 | 171 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | MTCYBP12-201 | ENST00000440559 | 1134 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC245517.2-201 | ENST00000442890 | 346 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | NDUFA5P8-201 | ENST00000449019 | 346 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC144530.1-201 | ENST00000452862 | 555 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AL358876.1-201 | ENST00000453364 | 1075 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AL354710.1-201 | ENST00000453641 | 246 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AL450344.1-201 | ENST00000456018 | 639 nt | TSL 2 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | IQCJ-SCHIP1-AS1-201 | ENST00000460574 | 508 nt | TSL 3 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC021660.1-201 | ENST00000465006 | 554 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | RPL32P33-201 | ENST00000487023 | 394 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC092916.1-201 | ENST00000497896 | 411 nt | TSL 3 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | MYL12BP2-201 | ENST00000503948 | 512 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | CDH12P2-201 | ENST00000504393 | 298 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | LINC01339-201 | ENST00000505712 | 440 nt | TSL 2 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC109481.1-201 | ENST00000509173 | 282 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC114284.1-201 | ENST00000511422 | 1114 nt | TSL 2 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | EIF3KP3-201 | ENST00000514461 | 639 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | SNORD46.2-201 | ENST00000516021 | 102 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | SCARNA20.4-201 | ENST00000516969 | 131 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC008663.1-201 | ENST00000519821 | 455 nt | TSL 4 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | MTERF3-205 | ENST00000524341 | 776 nt | TSL 3 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | PAFAH1B2-206 | ENST00000530272 | 850 nt | TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC027369.5-201 | ENST00000533838 | 755 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AL590385.2-201 | ENST00000537821 | 553 nt | TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | GPRC5D-AS1-205 | ENST00000540198 | 404 nt | TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AP002518.2-201 | ENST00000544925 | 393 nt | TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC125612.1-201 | ENST00000547580 | 377 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | LSM3P2-201 | ENST00000551246 | 273 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | PRPF19P1-201 | ENST00000584766 | 898 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC002398.1-201 | ENST00000589397 | 427 nt | TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC015802.2-201 | ENST00000589690 | 189 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AP005431.1-201 | ENST00000618479 | 319 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC074276.2-201 | ENST00000619891 | 348 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | OR5R1-201 | ENST00000623286 | 975 nt | APPRIS P1 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AL139220.2-221 | ENST00000628123 | 395 nt | TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AL357060.1-201 | ENST00000638039 | 977 nt | TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | ART3-203 | ENST00000355810 | 1561 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | CCDC169-204 | ENST00000379864 | 5944 nt | TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | MBNL1-203 | ENST00000324196 | 5225 nt | TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | PUS10-203 | ENST00000407787 | 1820 nt | APPRIS P1 TSL 2 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC010329.2-201 | ENST00000595195 | 2737 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | CHM-201 | ENST00000357749 | 5442 nt | APPRIS P1 TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | OR2AT4-205 | ENST00000641931 | 8357 nt | APPRIS P1 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | ARHGAP18-201 | ENST00000368149 | 4462 nt | APPRIS P1 TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | ALCAM-205 | ENST00000472644 | 4189 nt | TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | PLEKHG7-201 | ENST00000344636 | 3868 nt | TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | MOXD1-201 | ENST00000336749 | 2950 nt | TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | AC104623.2-202 | ENST00000623477 | 4002 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | ARPP19-208 | ENST00000566423 | 5362 nt | APPRIS P1 TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | GAPT-202 | ENST00000396776 | 3016 nt | APPRIS P1 TSL 2 BASIC | 5.05 | □□□□□ -1.6 | | |
| NPRL3 | Q12980 | KCNRG-202 | ENST00000360473 | 1623 nt | TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |