Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH1Q08174 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH1Q08174 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDH1Q08174 AL118496.2-201ENST00000448300 230 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 AL034418.1-201ENST00000448675 860 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH1Q08174 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH1Q08174 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDH1Q08174 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH1Q08174 SRP68P2-201ENST00000456184 254 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 SNORD42A-201ENST00000459584 64 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 RPSAP48-201ENST00000466509 889 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 RN7SL143P-201ENST00000496780 297 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 AC008628.2-201ENST00000502605 298 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDH1Q08174 AC021220.1-201ENST00000507445 630 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 DCAF13P2-201ENST00000514188 555 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.71□□□□□ -1.34
PCDH1Q08174 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.71□□□□□ -1.34
PCDH1Q08174 NPIPB14P-203ENST00000532298 987 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
PCDH1Q08174 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDH1Q08174 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDH1Q08174 AC005034.5-201ENST00000604219 466 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 AC005084.1-201ENST00000605160 304 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 AC010133.1-201ENST00000615809 842 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.71□□□□□ -1.34
PCDH1Q08174 AC120057.5-201ENST00000623840 154 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDH1Q08174 AL354702.2-202ENST00000641481 890 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.71□□□□□ -1.34
PCDH1Q08174 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.71□□□□□ -1.34
PCDH1Q08174 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH1Q08174 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH1Q08174 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH1Q08174 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDH1Q08174 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
PCDH1Q08174 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
PCDH1Q08174 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDH1Q08174 AC102941.1-201ENST00000567616 1537 ntBASIC6.71□□□□□ -1.34
PCDH1Q08174 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDH1Q08174 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
PCDH1Q08174 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH1Q08174 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH1Q08174 AC007938.1-201ENST00000562524 2902 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH1Q08174 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH1Q08174 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
PCDH1Q08174 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH1Q08174 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDH1Q08174 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
PCDH1Q08174 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH1Q08174 CDY19P-201ENST00000411668 1613 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 CDY18P-201ENST00000438294 1609 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH1Q08174 TMSB4XP4-201ENST00000323496 618 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PCDH1Q08174 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PCDH1Q08174 RNU1-24P-201ENST00000364285 165 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH1Q08174 Y_RNA.453-201ENST00000384223 109 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 RNA5SP53-201ENST00000391299 120 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 RPS3AP23-201ENST00000401762 784 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 SNORA11C-201ENST00000408532 129 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 RN7SKP148-201ENST00000410179 275 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDH1Q08174 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDH1Q08174 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDH1Q08174 AL512649.1-201ENST00000428997 581 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
PCDH1Q08174 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDH1Q08174 BTF3P10-201ENST00000433415 495 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDH1Q08174 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDH1Q08174 AC244505.5-201ENST00000443639 207 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 GDI2P2-201ENST00000445131 608 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDH1Q08174 AC093166.3-201ENST00000448785 303 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 PDSS1P2-201ENST00000449397 678 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 FDX1P2-201ENST00000450769 375 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDH1Q08174 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDH1Q08174 AC079193.1-201ENST00000460497 588 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 RPL5P15-201ENST00000475870 897 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDH1Q08174 AC023818.1-201ENST00000498379 384 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDH1Q08174 PDLIM1P4-201ENST00000504327 1006 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 AC091133.4-201ENST00000511142 308 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 AC084337.1-201ENST00000524809 686 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 AP001994.1-201ENST00000527539 826 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDH1Q08174 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
PCDH1Q08174 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDH1Q08174 AC027667.1-201ENST00000545814 304 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 RAB11AP2-201ENST00000545905 639 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 AC121758.1-202ENST00000556917 658 ntBASIC6.7□□□□□ -1.34
PCDH1Q08174 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDH1Q08174 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDH1Q08174 UBE2FP2-201ENST00000566646 462 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms