Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.96□□□□□ -1.45
CCNA1P78396 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
CCNA1P78396 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
CCNA1P78396 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCNA1P78396 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.96□□□□□ -1.46
CCNA1P78396 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCNA1P78396 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCNA1P78396 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CCNA1P78396 RNVU1-6-201ENST00000364688 164 ntBASIC5.96□□□□□ -1.46
CCNA1P78396 RN7SKP114-201ENST00000410327 279 ntBASIC5.96□□□□□ -1.46
CCNA1P78396 AC092017.2-201ENST00000427600 362 ntBASIC5.96□□□□□ -1.46
CCNA1P78396 HSPD1P12-201ENST00000429127 1069 ntBASIC5.96□□□□□ -1.46
CCNA1P78396 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.96□□□□□ -1.46
CCNA1P78396 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCNA1P78396 AL138878.2-201ENST00000440581 1241 ntBASIC5.96□□□□□ -1.46
CCNA1P78396 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.96□□□□□ -1.46
CCNA1P78396 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.96□□□□□ -1.46
CCNA1P78396 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.96□□□□□ -1.46
CCNA1P78396 SEPT7P3-201ENST00000455017 621 ntBASIC5.96□□□□□ -1.46
CCNA1P78396 RPS29P33-201ENST00000456717 146 ntBASIC5.96□□□□□ -1.46
CCNA1P78396 ST13P12-201ENST00000508958 1094 ntBASIC5.96□□□□□ -1.46
CCNA1P78396 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.96□□□□□ -1.46
CCNA1P78396 AC009117.1-201ENST00000563948 554 ntBASIC5.96□□□□□ -1.46
CCNA1P78396 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.96□□□□□ -1.46
CCNA1P78396 AC009237.13-201ENST00000603193 276 ntBASIC5.96□□□□□ -1.46
CCNA1P78396 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCNA1P78396 AL161616.1-201ENST00000611867 286 ntBASIC5.96□□□□□ -1.46
CCNA1P78396 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.96□□□□□ -1.46
CCNA1P78396 MIR6810-201ENST00000622701 70 ntBASIC5.96□□□□□ -1.46
CCNA1P78396 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCNA1P78396 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCNA1P78396 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCNA1P78396 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCNA1P78396 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCNA1P78396 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCNA1P78396 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCNA1P78396 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.95□□□□□ -1.46
CCNA1P78396 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CCNA1P78396 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CCNA1P78396 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCNA1P78396 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCNA1P78396 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CCNA1P78396 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.95□□□□□ -1.46
CCNA1P78396 RAB28P1-201ENST00000411517 641 ntBASIC5.95□□□□□ -1.46
CCNA1P78396 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.95□□□□□ -1.46
CCNA1P78396 AL590399.2-201ENST00000427536 309 ntBASIC5.95□□□□□ -1.46
CCNA1P78396 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.95□□□□□ -1.46
CCNA1P78396 AC006427.1-201ENST00000514359 712 ntBASIC5.95□□□□□ -1.46
CCNA1P78396 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.95□□□□□ -1.46
CCNA1P78396 AC022360.1-201ENST00000521058 340 ntBASIC5.95□□□□□ -1.46
CCNA1P78396 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCNA1P78396 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.95□□□□□ -1.46
CCNA1P78396 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.95□□□□□ -1.46
CCNA1P78396 NPM1P5-201ENST00000557228 838 ntBASIC5.95□□□□□ -1.46
CCNA1P78396 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.95□□□□□ -1.46
CCNA1P78396 AC079075.1-201ENST00000559543 878 ntBASIC5.95□□□□□ -1.46
CCNA1P78396 BGLT3-201ENST00000564523 994 ntBASIC5.95□□□□□ -1.46
CCNA1P78396 MIR4270-201ENST00000581799 70 ntBASIC5.95□□□□□ -1.46
CCNA1P78396 MIR4737-201ENST00000583979 81 ntBASIC5.95□□□□□ -1.46
CCNA1P78396 AC234771.5-201ENST00000600161 514 ntBASIC5.95□□□□□ -1.46
CCNA1P78396 AL031320.1-201ENST00000604177 357 ntBASIC5.95□□□□□ -1.46
CCNA1P78396 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.95□□□□□ -1.46
CCNA1P78396 AL022394.1-201ENST00000606979 292 ntBASIC5.95□□□□□ -1.46
CCNA1P78396 AL139124.1-201ENST00000609123 421 ntBASIC5.95□□□□□ -1.46
CCNA1P78396 AP005131.7-201ENST00000610087 611 ntBASIC5.95□□□□□ -1.46
CCNA1P78396 AL627230.1-201ENST00000613077 211 ntBASIC5.95□□□□□ -1.46
CCNA1P78396 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.95□□□□□ -1.46
CCNA1P78396 AL591926.8-201ENST00000616876 211 ntBASIC5.95□□□□□ -1.46
CCNA1P78396 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.95□□□□□ -1.46
CCNA1P78396 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.95□□□□□ -1.46
CCNA1P78396 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCNA1P78396 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CCNA1P78396 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.95□□□□□ -1.46
CCNA1P78396 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCNA1P78396 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCNA1P78396 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CCNA1P78396 SDAD1P1-202ENST00000524156 2051 ntBASIC5.95□□□□□ -1.46
CCNA1P78396 AC079298.1-201ENST00000625026 1619 ntBASIC5.95□□□□□ -1.46
CCNA1P78396 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCNA1P78396 CR382285.2-201ENST00000624662 1495 ntBASIC5.95□□□□□ -1.46
CCNA1P78396 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.95□□□□□ -1.46
CCNA1P78396 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCNA1P78396 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCNA1P78396 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCNA1P78396 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCNA1P78396 IRF5P1-201ENST00000504852 2164 ntBASIC5.94□□□□□ -1.46
CCNA1P78396 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
CCNA1P78396 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCNA1P78396 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CCNA1P78396 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.94□□□□□ -1.46
CCNA1P78396 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCNA1P78396 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CCNA1P78396 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCNA1P78396 RN7SKP153-201ENST00000365026 316 ntBASIC5.94□□□□□ -1.46
CCNA1P78396 RNA5SP428-201ENST00000365129 132 ntBASIC5.94□□□□□ -1.46
CCNA1P78396 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.94□□□□□ -1.46
CCNA1P78396 PPIAP9-201ENST00000403866 498 ntBASIC5.94□□□□□ -1.46
CCNA1P78396 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.94□□□□□ -1.46
CCNA1P78396 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.94□□□□□ -1.46
CCNA1P78396 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms