Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.68□□□□□ -1.5
TPM4P67936 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TPM4P67936 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TPM4P67936 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.68□□□□□ -1.5
TPM4P67936 CDC27P2-201ENST00000425026 1922 ntBASIC5.68□□□□□ -1.5
TPM4P67936 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TPM4P67936 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.67□□□□□ -1.5
TPM4P67936 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
TPM4P67936 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.67□□□□□ -1.5
TPM4P67936 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TPM4P67936 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.67□□□□□ -1.5
TPM4P67936 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TPM4P67936 SNORA2.3-201ENST00000383920 135 ntBASIC5.67□□□□□ -1.5
TPM4P67936 SLC20A1P1-201ENST00000413906 956 ntBASIC5.67□□□□□ -1.5
TPM4P67936 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.67□□□□□ -1.5
TPM4P67936 PCNPP2-201ENST00000441651 455 ntBASIC5.67□□□□□ -1.5
TPM4P67936 RPL7AP61-201ENST00000443410 636 ntBASIC5.67□□□□□ -1.5
TPM4P67936 RN7SL443P-201ENST00000464331 290 ntBASIC5.67□□□□□ -1.5
TPM4P67936 AC022795.1-201ENST00000473808 480 ntBASIC5.67□□□□□ -1.5
TPM4P67936 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.67□□□□□ -1.5
TPM4P67936 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.67□□□□□ -1.5
TPM4P67936 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.67□□□□□ -1.5
TPM4P67936 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.67□□□□□ -1.5
TPM4P67936 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.67□□□□□ -1.5
TPM4P67936 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.67□□□□□ -1.5
TPM4P67936 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.67□□□□□ -1.5
TPM4P67936 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.67□□□□□ -1.5
TPM4P67936 AC116553.2-201ENST00000564203 463 ntBASIC5.67□□□□□ -1.5
TPM4P67936 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.67□□□□□ -1.5
TPM4P67936 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.67□□□□□ -1.5
TPM4P67936 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.67□□□□□ -1.5
TPM4P67936 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TPM4P67936 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TPM4P67936 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
TPM4P67936 AC011503.2-201ENST00000594230 1500 ntBASIC5.67□□□□□ -1.5
TPM4P67936 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TPM4P67936 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.66□□□□□ -1.5
TPM4P67936 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
TPM4P67936 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TPM4P67936 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TPM4P67936 AP001273.1-201ENST00000624493 3152 ntBASIC5.66□□□□□ -1.5
TPM4P67936 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TPM4P67936 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.66□□□□□ -1.5
TPM4P67936 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TPM4P67936 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.66□□□□□ -1.5
TPM4P67936 EIF4A1P1-201ENST00000420241 934 ntBASIC5.66□□□□□ -1.5
TPM4P67936 NPM1P22-201ENST00000427761 952 ntBASIC5.66□□□□□ -1.5
TPM4P67936 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.66□□□□□ -1.5
TPM4P67936 AC002504.1-201ENST00000438281 691 ntBASIC5.66□□□□□ -1.5
TPM4P67936 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.66□□□□□ -1.5
TPM4P67936 AC090686.1-201ENST00000481577 749 ntBASIC5.66□□□□□ -1.5
TPM4P67936 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.66□□□□□ -1.5
TPM4P67936 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.66□□□□□ -1.5
TPM4P67936 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.66□□□□□ -1.5
TPM4P67936 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.66□□□□□ -1.5
TPM4P67936 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.66□□□□□ -1.5
TPM4P67936 AC010547.6-201ENST00000571789 193 ntBASIC5.66□□□□□ -1.5
TPM4P67936 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TPM4P67936 MIR4505-201ENST00000582238 73 ntBASIC5.66□□□□□ -1.5
TPM4P67936 AP005131.7-201ENST00000610087 611 ntBASIC5.66□□□□□ -1.5
TPM4P67936 AC097505.1-201ENST00000610199 565 ntBASIC5.66□□□□□ -1.5
TPM4P67936 WBP1LP8-201ENST00000617401 327 ntBASIC5.66□□□□□ -1.5
TPM4P67936 AL596275.2-207ENST00000641188 675 ntBASIC5.66□□□□□ -1.5
TPM4P67936 AL596275.2-204ENST00000641628 552 ntBASIC5.66□□□□□ -1.5
TPM4P67936 AL596275.2-206ENST00000641957 626 ntBASIC5.66□□□□□ -1.5
TPM4P67936 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TPM4P67936 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TPM4P67936 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
TPM4P67936 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.65□□□□□ -1.5
TPM4P67936 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TPM4P67936 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TPM4P67936 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TPM4P67936 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TPM4P67936 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.65□□□□□ -1.5
TPM4P67936 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TPM4P67936 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TPM4P67936 RNA5SP335-201ENST00000363817 110 ntBASIC5.65□□□□□ -1.5
TPM4P67936 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TPM4P67936 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
TPM4P67936 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.65□□□□□ -1.5
TPM4P67936 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.65□□□□□ -1.5
TPM4P67936 TMBIM7P-201ENST00000418074 855 ntBASIC5.65□□□□□ -1.5
TPM4P67936 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.65□□□□□ -1.5
TPM4P67936 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.65□□□□□ -1.5
TPM4P67936 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.65□□□□□ -1.5
TPM4P67936 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.65□□□□□ -1.5
TPM4P67936 AL133445.1-201ENST00000467051 452 ntBASIC5.65□□□□□ -1.5
TPM4P67936 AC020890.1-201ENST00000491837 504 ntBASIC5.65□□□□□ -1.5
TPM4P67936 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.65□□□□□ -1.5
TPM4P67936 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TPM4P67936 LDHBP3-201ENST00000514909 822 ntBASIC5.65□□□□□ -1.5
TPM4P67936 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.65□□□□□ -1.5
TPM4P67936 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
TPM4P67936 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.65□□□□□ -1.5
TPM4P67936 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TPM4P67936 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TPM4P67936 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.65□□□□□ -1.5
TPM4P67936 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TPM4P67936 AL512310.9-201ENST00000553311 948 ntBASIC5.65□□□□□ -1.5
TPM4P67936 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms