Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 OR5H7P-201ENST00000514084 930 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.54□□□□□ -1.52
CLRN1P58418 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.54□□□□□ -1.52
CLRN1P58418 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.54□□□□□ -1.52
CLRN1P58418 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.54□□□□□ -1.52
CLRN1P58418 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.54□□□□□ -1.52
CLRN1P58418 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.54□□□□□ -1.52
CLRN1P58418 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.54□□□□□ -1.52
CLRN1P58418 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.54□□□□□ -1.52
CLRN1P58418 AC044913.1-201ENST00000557200 430 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.54□□□□□ -1.52
CLRN1P58418 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.54□□□□□ -1.52
CLRN1P58418 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLRN1P58418 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.54□□□□□ -1.52
CLRN1P58418 NPIPB1P-202ENST00000588786 828 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 DUXAP11-201ENST00000603858 526 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 AC011891.2-201ENST00000604949 397 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 AC010738.1-201ENST00000604970 987 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 AL353600.1-201ENST00000608148 251 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLRN1P58418 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLRN1P58418 AC090246.1-201ENST00000616499 426 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.54□□□□□ -1.52
CLRN1P58418 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.54□□□□□ -1.52
CLRN1P58418 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.54□□□□□ -1.52
CLRN1P58418 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CLRN1P58418 TMCC1P1-201ENST00000518897 1980 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.54□□□□□ -1.52
CLRN1P58418 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.54□□□□□ -1.52
CLRN1P58418 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLRN1P58418 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLRN1P58418 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLRN1P58418 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.54□□□□□ -1.52
CLRN1P58418 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLRN1P58418 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLRN1P58418 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 HDAC1P2-201ENST00000453661 1398 ntBASIC5.54□□□□□ -1.52
CLRN1P58418 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLRN1P58418 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CLRN1P58418 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLRN1P58418 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.53□□□□□ -1.52
CLRN1P58418 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CLRN1P58418 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CLRN1P58418 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLRN1P58418 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.53□□□□□ -1.52
CLRN1P58418 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLRN1P58418 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLRN1P58418 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLRN1P58418 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CLRN1P58418 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CLRN1P58418 SNORA43.1-201ENST00000364863 140 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.53□□□□□ -1.52
CLRN1P58418 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.53□□□□□ -1.52
CLRN1P58418 RPS27AP11-201ENST00000402798 447 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 NUDT19P3-201ENST00000404698 555 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 AL355379.1-201ENST00000405542 640 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.53□□□□□ -1.52
CLRN1P58418 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLRN1P58418 Y_RNA.599-201ENST00000410489 109 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 RN7SKP166-201ENST00000410812 305 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.53□□□□□ -1.52
CLRN1P58418 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.53□□□□□ -1.52
CLRN1P58418 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.53□□□□□ -1.52
CLRN1P58418 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.53□□□□□ -1.52
CLRN1P58418 AL365220.1-201ENST00000432923 399 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 MTCO1P52-201ENST00000433928 531 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 AC234064.1-201ENST00000436312 247 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.53□□□□□ -1.52
CLRN1P58418 MRPS21P3-201ENST00000436696 262 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.53□□□□□ -1.52
CLRN1P58418 AL354941.1-201ENST00000438600 464 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 PPIAP10-201ENST00000438675 458 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.53□□□□□ -1.52
CLRN1P58418 AL645936.1-201ENST00000441979 518 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 MTCO2P3-201ENST00000442543 421 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.53□□□□□ -1.52
CLRN1P58418 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.53□□□□□ -1.52
CLRN1P58418 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.53□□□□□ -1.52
CLRN1P58418 CEACAMP11-201ENST00000455211 583 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.53□□□□□ -1.52
CLRN1P58418 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.53□□□□□ -1.52
CLRN1P58418 MTCO2P18-201ENST00000457151 658 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.53□□□□□ -1.52
CLRN1P58418 AC104971.1-201ENST00000495117 578 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLRN1P58418 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.53□□□□□ -1.52
CLRN1P58418 RNA5SP206-201ENST00000516703 121 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.53□□□□□ -1.52
CLRN1P58418 AC083923.1-201ENST00000523708 376 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 AP001804.1-201ENST00000526868 919 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLRN1P58418 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.53□□□□□ -1.52
CLRN1P58418 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.53□□□□□ -1.52
CLRN1P58418 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.53□□□□□ -1.52
CLRN1P58418 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.53□□□□□ -1.52
CLRN1P58418 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.53□□□□□ -1.52
CLRN1P58418 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.53□□□□□ -1.52
CLRN1P58418 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms