Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN18P56856 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
CLDN18P56856 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN18P56856 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLDN18P56856 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN18P56856 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN18P56856 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CLDN18P56856 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN18P56856 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.74□□□□□ -1.65
CLDN18P56856 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN18P56856 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN18P56856 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN18P56856 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN18P56856 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN18P56856 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN18P56856 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN18P56856 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN18P56856 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN18P56856 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDN18P56856 SNORA70-201ENST00000384436 135 ntBASIC4.74□□□□□ -1.65
CLDN18P56856 SETP15-201ENST00000412724 337 ntBASIC4.74□□□□□ -1.65
CLDN18P56856 AC096644.3-201ENST00000416788 338 ntBASIC4.74□□□□□ -1.65
CLDN18P56856 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDN18P56856 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN18P56856 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.74□□□□□ -1.65
CLDN18P56856 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDN18P56856 AC023271.1-201ENST00000445936 1090 ntBASIC4.74□□□□□ -1.65
CLDN18P56856 OR9N1P-201ENST00000491296 333 ntBASIC4.74□□□□□ -1.65
CLDN18P56856 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDN18P56856 IGBP1P4-201ENST00000503202 879 ntBASIC4.74□□□□□ -1.65
CLDN18P56856 OR5M14P-201ENST00000506803 618 ntBASIC4.74□□□□□ -1.65
CLDN18P56856 SEPT10P1-201ENST00000517342 1162 ntBASIC4.74□□□□□ -1.65
CLDN18P56856 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDN18P56856 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDN18P56856 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CLDN18P56856 AC134349.2-201ENST00000535136 910 ntBASIC4.74□□□□□ -1.65
CLDN18P56856 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDN18P56856 AC125612.1-201ENST00000547580 377 ntBASIC4.74□□□□□ -1.65
CLDN18P56856 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.74□□□□□ -1.65
CLDN18P56856 AC044860.2-201ENST00000561005 179 ntBASIC4.74□□□□□ -1.65
CLDN18P56856 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDN18P56856 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDN18P56856 AP005262.1-201ENST00000582646 997 ntBASIC4.74□□□□□ -1.65
CLDN18P56856 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.74□□□□□ -1.65
CLDN18P56856 TAS2R6P-201ENST00000605022 826 ntBASIC4.74□□□□□ -1.65
CLDN18P56856 SNORA35B-201ENST00000607417 129 ntBASIC4.74□□□□□ -1.65
CLDN18P56856 AP003400.2-201ENST00000624036 666 ntBASIC4.74□□□□□ -1.65
CLDN18P56856 MTCO1P1-201ENST00000624263 1081 ntBASIC4.74□□□□□ -1.65
CLDN18P56856 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN18P56856 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN18P56856 AC092747.4-201ENST00000620519 1861 ntBASIC4.74□□□□□ -1.65
CLDN18P56856 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN18P56856 AC079298.1-201ENST00000625026 1619 ntBASIC4.74□□□□□ -1.65
CLDN18P56856 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN18P56856 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN18P56856 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN18P56856 AL034549.2-201ENST00000618285 3373 ntBASIC4.74□□□□□ -1.65
CLDN18P56856 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN18P56856 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN18P56856 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN18P56856 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN18P56856 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CLDN18P56856 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN18P56856 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN18P56856 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN18P56856 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN18P56856 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN18P56856 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN18P56856 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.73□□□□□ -1.65
CLDN18P56856 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN18P56856 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN18P56856 RNA5SP507-201ENST00000363603 121 ntBASIC4.73□□□□□ -1.65
CLDN18P56856 OR13C3-201ENST00000374781 1108 ntBASIC4.73□□□□□ -1.65
CLDN18P56856 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CLDN18P56856 MIR765-201ENST00000390226 114 ntBASIC4.73□□□□□ -1.65
CLDN18P56856 U3.36-201ENST00000408418 213 ntBASIC4.73□□□□□ -1.65
CLDN18P56856 RPL23AP27-201ENST00000415161 451 ntBASIC4.73□□□□□ -1.65
CLDN18P56856 RAB9AP4-201ENST00000415230 609 ntBASIC4.73□□□□□ -1.65
CLDN18P56856 AL158827.1-201ENST00000416300 391 ntBASIC4.73□□□□□ -1.65
CLDN18P56856 OR6C64P-201ENST00000419708 825 ntBASIC4.73□□□□□ -1.65
CLDN18P56856 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN18P56856 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN18P56856 AC124944.2-201ENST00000429866 1242 ntBASIC4.73□□□□□ -1.65
CLDN18P56856 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN18P56856 PTMAP6-201ENST00000439110 327 ntBASIC4.73□□□□□ -1.65
CLDN18P56856 RPL5P25-201ENST00000441148 775 ntBASIC4.73□□□□□ -1.65
CLDN18P56856 AC009127.1-201ENST00000467090 155 ntBASIC4.73□□□□□ -1.65
CLDN18P56856 CBX1P5-201ENST00000475330 559 ntBASIC4.73□□□□□ -1.65
CLDN18P56856 BX284632.1-201ENST00000478218 541 ntBASIC4.73□□□□□ -1.65
CLDN18P56856 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN18P56856 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.73□□□□□ -1.65
CLDN18P56856 GTF2F2P1-201ENST00000511083 675 ntBASIC4.73□□□□□ -1.65
CLDN18P56856 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN18P56856 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CLDN18P56856 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.73□□□□□ -1.65
CLDN18P56856 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.73□□□□□ -1.65
CLDN18P56856 MIR3691-201ENST00000578066 90 ntBASIC4.73□□□□□ -1.65
CLDN18P56856 MIR7853-201ENST00000584820 132 ntBASIC4.73□□□□□ -1.65
CLDN18P56856 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN18P56856 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms