Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.03□□□□□ -1.6
PKNOX1P55347 RPEP1-201ENST00000504507 658 ntBASIC5.03□□□□□ -1.6
PKNOX1P55347 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.03□□□□□ -1.6
PKNOX1P55347 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.03□□□□□ -1.6
PKNOX1P55347 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.03□□□□□ -1.6
PKNOX1P55347 AC105031.1-201ENST00000518550 476 ntBASIC5.03□□□□□ -1.6
PKNOX1P55347 AC022616.2-201ENST00000523185 300 ntBASIC5.03□□□□□ -1.6
PKNOX1P55347 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.03□□□□□ -1.6
PKNOX1P55347 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.03□□□□□ -1.6
PKNOX1P55347 AC022404.1-201ENST00000555320 273 ntBASIC5.03□□□□□ -1.6
PKNOX1P55347 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.03□□□□□ -1.6
PKNOX1P55347 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.03□□□□□ -1.6
PKNOX1P55347 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.03□□□□□ -1.6
PKNOX1P55347 AC115989.2-201ENST00000578640 563 ntBASIC5.03□□□□□ -1.6
PKNOX1P55347 BNIP3P35-201ENST00000604530 490 ntBASIC5.03□□□□□ -1.6
PKNOX1P55347 AC104695.2-201ENST00000605056 775 ntBASIC5.03□□□□□ -1.6
PKNOX1P55347 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.03□□□□□ -1.6
PKNOX1P55347 AC127024.6-201ENST00000621598 424 ntBASIC5.03□□□□□ -1.6
PKNOX1P55347 AP001962.1-201ENST00000624114 559 ntBASIC5.03□□□□□ -1.6
PKNOX1P55347 AC135068.12-201ENST00000637370 931 ntBASIC5.03□□□□□ -1.6
PKNOX1P55347 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PKNOX1P55347 AP001642.1-201ENST00000624727 2117 ntBASIC5.03□□□□□ -1.6
PKNOX1P55347 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PKNOX1P55347 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
PKNOX1P55347 AC112255.1-201ENST00000624070 2493 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PKNOX1P55347 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.02□□□□□ -1.61
PKNOX1P55347 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
PKNOX1P55347 UBBP2-201ENST00000376781 231 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 RNU1-149P-201ENST00000390870 161 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 OOSP1-201ENST00000398992 1270 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 AL078599.1-201ENST00000402075 293 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 OR6C64P-201ENST00000419708 825 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 AL133325.1-201ENST00000421090 382 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 COX6CP13-201ENST00000428703 226 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.02□□□□□ -1.61
PKNOX1P55347 NFYAP1-201ENST00000431953 972 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.02□□□□□ -1.61
PKNOX1P55347 RPL35AP21-201ENST00000437667 333 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.02□□□□□ -1.61
PKNOX1P55347 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PKNOX1P55347 MRPL35P2-201ENST00000448009 511 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 BTF3P6-201ENST00000448054 499 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 YWHAEP1-201ENST00000453697 763 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 AC005412.2-201ENST00000492004 341 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 RN7SL466P-201ENST00000497546 295 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.02□□□□□ -1.61
PKNOX1P55347 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.02□□□□□ -1.61
PKNOX1P55347 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.02□□□□□ -1.61
PKNOX1P55347 HMGB3P16-201ENST00000508037 287 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 AL671862.1-201ENST00000515851 349 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.02□□□□□ -1.61
PKNOX1P55347 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.02□□□□□ -1.61
PKNOX1P55347 AC027544.3-201ENST00000535082 757 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 BNIP3P1-201ENST00000547295 580 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.02□□□□□ -1.61
PKNOX1P55347 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.02□□□□□ -1.61
PKNOX1P55347 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.02□□□□□ -1.61
PKNOX1P55347 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.02□□□□□ -1.61
PKNOX1P55347 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PKNOX1P55347 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.02□□□□□ -1.61
PKNOX1P55347 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.02□□□□□ -1.61
PKNOX1P55347 SUGT1P3-202ENST00000604259 383 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 AL139407.1-201ENST00000613826 1175 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.02□□□□□ -1.61
PKNOX1P55347 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.02□□□□□ -1.61
PKNOX1P55347 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.02□□□□□ -1.61
PKNOX1P55347 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PKNOX1P55347 AC011447.7-201ENST00000624228 1590 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PKNOX1P55347 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PKNOX1P55347 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PKNOX1P55347 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PKNOX1P55347 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.02□□□□□ -1.61
PKNOX1P55347 TTC39DP-201ENST00000416781 1688 ntBASIC5.02□□□□□ -1.61
PKNOX1P55347 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PKNOX1P55347 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 CR382285.2-201ENST00000624662 1495 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PKNOX1P55347 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PKNOX1P55347 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
PKNOX1P55347 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PKNOX1P55347 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PKNOX1P55347 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PKNOX1P55347 AC104260.2-201ENST00000623551 3497 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PKNOX1P55347 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.01□□□□□ -1.61
PKNOX1P55347 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.01□□□□□ -1.61
PKNOX1P55347 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PKNOX1P55347 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PKNOX1P55347 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PKNOX1P55347 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PKNOX1P55347 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PKNOX1P55347 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.01□□□□□ -1.61
PKNOX1P55347 NUDT19P3-201ENST00000404698 555 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 U3.32-201ENST00000408116 212 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.01□□□□□ -1.61
PKNOX1P55347 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.01□□□□□ -1.61
PKNOX1P55347 RN7SKP293-201ENST00000411389 296 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms