Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH12P55289 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH12P55289 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH12P55289 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CDH12P55289 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CDH12P55289 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH12P55289 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH12P55289 HMGB3P19-201ENST00000403971 560 ntBASIC5.18□□□□□ -1.58
CDH12P55289 AL355615.1-201ENST00000406187 641 ntBASIC5.18□□□□□ -1.58
CDH12P55289 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH12P55289 AC096533.1-201ENST00000411645 353 ntBASIC5.18□□□□□ -1.58
CDH12P55289 RPS6P23-201ENST00000413224 722 ntBASIC5.18□□□□□ -1.58
CDH12P55289 AL445183.3-201ENST00000414168 502 ntBASIC5.18□□□□□ -1.58
CDH12P55289 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH12P55289 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH12P55289 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH12P55289 OR51A6P-201ENST00000418680 1004 ntBASIC5.18□□□□□ -1.58
CDH12P55289 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH12P55289 BX323845.3-201ENST00000428215 527 ntBASIC5.18□□□□□ -1.58
CDH12P55289 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH12P55289 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH12P55289 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH12P55289 IGBP1P3-201ENST00000447449 1000 ntBASIC5.18□□□□□ -1.58
CDH12P55289 HMGB1P26-201ENST00000452520 628 ntBASIC5.18□□□□□ -1.58
CDH12P55289 CBX1P2-201ENST00000453841 458 ntBASIC5.18□□□□□ -1.58
CDH12P55289 AC069277.2-201ENST00000454211 432 ntBASIC5.18□□□□□ -1.58
CDH12P55289 RN7SL188P-201ENST00000469842 285 ntBASIC5.18□□□□□ -1.58
CDH12P55289 CBX1P5-201ENST00000475330 559 ntBASIC5.18□□□□□ -1.58
CDH12P55289 RPS17P15-201ENST00000475609 349 ntBASIC5.18□□□□□ -1.58
CDH12P55289 RPS3AP6-201ENST00000484430 795 ntBASIC5.18□□□□□ -1.58
CDH12P55289 AC009120.1-201ENST00000493458 473 ntBASIC5.18□□□□□ -1.58
CDH12P55289 SUMO2P5-201ENST00000506790 245 ntBASIC5.18□□□□□ -1.58
CDH12P55289 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH12P55289 SCARNA6.1-201ENST00000516989 238 ntBASIC5.18□□□□□ -1.58
CDH12P55289 AC021678.3-201ENST00000517893 476 ntBASIC5.18□□□□□ -1.58
CDH12P55289 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH12P55289 AC079064.1-201ENST00000528365 362 ntBASIC5.18□□□□□ -1.58
CDH12P55289 AC118942.1-201ENST00000529674 1035 ntBASIC5.18□□□□□ -1.58
CDH12P55289 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CDH12P55289 OR5AM1P-201ENST00000532136 1032 ntBASIC5.18□□□□□ -1.58
CDH12P55289 AC087894.1-201ENST00000538359 518 ntBASIC5.18□□□□□ -1.58
CDH12P55289 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH12P55289 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH12P55289 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH12P55289 AC021483.2-201ENST00000567415 758 ntBASIC5.18□□□□□ -1.58
CDH12P55289 MTATP6P24-201ENST00000576835 677 ntBASIC5.18□□□□□ -1.58
CDH12P55289 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH12P55289 MTCO2P22-201ENST00000603246 681 ntBASIC5.18□□□□□ -1.58
CDH12P55289 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH12P55289 AL078595.3-201ENST00000623815 1166 ntBASIC5.18□□□□□ -1.58
CDH12P55289 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH12P55289 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH12P55289 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH12P55289 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CDH12P55289 AC002525.1-201ENST00000624392 1622 ntBASIC5.18□□□□□ -1.58
CDH12P55289 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH12P55289 AC083899.1-201ENST00000454465 3819 ntBASIC5.18□□□□□ -1.58
CDH12P55289 AP005435.3-201ENST00000531260 3198 ntBASIC5.18□□□□□ -1.58
CDH12P55289 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH12P55289 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH12P55289 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH12P55289 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH12P55289 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CDH12P55289 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH12P55289 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH12P55289 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH12P55289 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.17□□□□□ -1.58
CDH12P55289 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH12P55289 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CDH12P55289 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH12P55289 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH12P55289 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH12P55289 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH12P55289 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH12P55289 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH12P55289 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
CDH12P55289 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH12P55289 RNU1-150P-201ENST00000362491 162 ntBASIC5.17□□□□□ -1.58
CDH12P55289 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CDH12P55289 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH12P55289 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH12P55289 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
CDH12P55289 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH12P55289 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH12P55289 RN7SKP199-201ENST00000410325 305 ntBASIC5.17□□□□□ -1.58
CDH12P55289 RPL26P37-201ENST00000411983 438 ntBASIC5.17□□□□□ -1.58
CDH12P55289 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH12P55289 DPPA2P2-201ENST00000418220 897 ntBASIC5.17□□□□□ -1.58
CDH12P55289 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH12P55289 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH12P55289 MTCYBP7-201ENST00000419540 1134 ntBASIC5.17□□□□□ -1.58
CDH12P55289 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH12P55289 AL034379.1-201ENST00000423216 253 ntBASIC5.17□□□□□ -1.58
CDH12P55289 AL136231.1-201ENST00000429407 730 ntBASIC5.17□□□□□ -1.58
CDH12P55289 RPL7P56-201ENST00000429441 717 ntBASIC5.17□□□□□ -1.58
CDH12P55289 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH12P55289 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH12P55289 TPTE2P3-201ENST00000441562 1189 ntBASIC5.17□□□□□ -1.58
CDH12P55289 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.17□□□□□ -1.58
CDH12P55289 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms