Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 GAPDHP14-201ENST00000450472 937 ntBASIC7.1□□□□□ -1.27
CLTCL1P53675 PRPF38AP1-201ENST00000451976 933 ntBASIC7.1□□□□□ -1.27
CLTCL1P53675 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC7.1□□□□□ -1.27
CLTCL1P53675 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC7.1□□□□□ -1.27
CLTCL1P53675 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC7.1□□□□□ -1.27
CLTCL1P53675 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC7.1□□□□□ -1.27
CLTCL1P53675 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC7.1□□□□□ -1.27
CLTCL1P53675 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CLTCL1P53675 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CLTCL1P53675 RN7SL802P-201ENST00000577858 299 ntBASIC7.1□□□□□ -1.27
CLTCL1P53675 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC7.1□□□□□ -1.27
CLTCL1P53675 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC7.1□□□□□ -1.27
CLTCL1P53675 SMG1P7-201ENST00000565246 2704 ntBASIC7.1□□□□□ -1.27
CLTCL1P53675 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC7.1□□□□□ -1.27
CLTCL1P53675 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CLTCL1P53675 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC7.1□□□□□ -1.27
CLTCL1P53675 AL117339.4-201ENST00000608335 7063 ntBASIC7.1□□□□□ -1.27
CLTCL1P53675 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
CLTCL1P53675 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CLTCL1P53675 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.1□□□□□ -1.27
CLTCL1P53675 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CLTCL1P53675 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
CLTCL1P53675 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CLTCL1P53675 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.1□□□□□ -1.27
CLTCL1P53675 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CLTCL1P53675 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC7.09□□□□□ -1.27
CLTCL1P53675 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CLTCL1P53675 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.09□□□□□ -1.27
CLTCL1P53675 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
CLTCL1P53675 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CLTCL1P53675 MAST4-207ENST00000407621 559 ntTSL 2 BASIC7.09□□□□□ -1.27
CLTCL1P53675 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC7.09□□□□□ -1.27
CLTCL1P53675 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC7.09□□□□□ -1.27
CLTCL1P53675 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC7.09□□□□□ -1.27
CLTCL1P53675 NDUFA5P9-201ENST00000472609 340 ntBASIC7.09□□□□□ -1.27
CLTCL1P53675 AC025674.1-201ENST00000507074 324 ntBASIC7.09□□□□□ -1.27
CLTCL1P53675 RNU4ATAC18P-201ENST00000516179 126 ntBASIC7.09□□□□□ -1.27
CLTCL1P53675 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC7.09□□□□□ -1.27
CLTCL1P53675 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC7.09□□□□□ -1.27
CLTCL1P53675 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.09□□□□□ -1.27
CLTCL1P53675 AC026367.3-201ENST00000619032 590 ntBASIC7.09□□□□□ -1.27
CLTCL1P53675 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC7.09□□□□□ -1.27
CLTCL1P53675 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC7.09□□□□□ -1.27
CLTCL1P53675 AL592148.3-201ENST00000608771 2646 ntBASIC7.09□□□□□ -1.27
CLTCL1P53675 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CLTCL1P53675 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC7.09□□□□□ -1.27
CLTCL1P53675 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC7.09□□□□□ -1.27
CLTCL1P53675 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CLTCL1P53675 API5-210ENST00000534600 1760 ntTSL 5 BASIC7.09□□□□□ -1.27
CLTCL1P53675 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC7.09□□□□□ -1.27
CLTCL1P53675 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.09□□□□□ -1.27
CLTCL1P53675 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
CLTCL1P53675 AL357515.1-201ENST00000402967 542 ntBASIC7.09□□□□□ -1.28
CLTCL1P53675 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.28
CLTCL1P53675 ELOCP19-201ENST00000411919 318 ntBASIC7.09□□□□□ -1.28
CLTCL1P53675 P2RY10P2-201ENST00000416730 913 ntBASIC7.09□□□□□ -1.28
CLTCL1P53675 RPS27AP7-201ENST00000422792 455 ntBASIC7.09□□□□□ -1.28
CLTCL1P53675 RPL18P10-201ENST00000425606 538 ntBASIC7.09□□□□□ -1.28
CLTCL1P53675 HNRNPA1P29-201ENST00000426409 879 ntBASIC7.09□□□□□ -1.28
CLTCL1P53675 CEACAMP6-201ENST00000452007 574 ntBASIC7.09□□□□□ -1.28
CLTCL1P53675 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC7.09□□□□□ -1.28
CLTCL1P53675 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC7.09□□□□□ -1.28
CLTCL1P53675 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC7.09□□□□□ -1.28
CLTCL1P53675 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CLTCL1P53675 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CLTCL1P53675 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC7.08□□□□□ -1.28
CLTCL1P53675 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CLTCL1P53675 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
CLTCL1P53675 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.08□□□□□ -1.28
CLTCL1P53675 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CLTCL1P53675 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CLTCL1P53675 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CLTCL1P53675 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CLTCL1P53675 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC7.08□□□□□ -1.28
CLTCL1P53675 GLUD1P9-201ENST00000420997 1173 ntBASIC7.08□□□□□ -1.28
CLTCL1P53675 AC073052.1-201ENST00000440417 714 ntBASIC7.08□□□□□ -1.28
CLTCL1P53675 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC7.08□□□□□ -1.28
CLTCL1P53675 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CLTCL1P53675 AC111000.3-201ENST00000508057 576 ntBASIC7.08□□□□□ -1.28
CLTCL1P53675 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.08□□□□□ -1.28
CLTCL1P53675 AC010424.2-201ENST00000607594 443 ntBASIC7.08□□□□□ -1.28
CLTCL1P53675 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC7.08□□□□□ -1.28
CLTCL1P53675 MIR6853-201ENST00000619642 74 ntBASIC7.08□□□□□ -1.28
CLTCL1P53675 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC7.08□□□□□ -1.28
CLTCL1P53675 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC7.08□□□□□ -1.28
CLTCL1P53675 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
CLTCL1P53675 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CLTCL1P53675 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC7.08□□□□□ -1.28
CLTCL1P53675 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC7.08□□□□□ -1.28
CLTCL1P53675 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CLTCL1P53675 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
CLTCL1P53675 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
CLTCL1P53675 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CLTCL1P53675 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CLTCL1P53675 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CLTCL1P53675 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.07□□□□□ -1.28
CLTCL1P53675 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CLTCL1P53675 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CLTCL1P53675 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC7.07□□□□□ -1.28
CLTCL1P53675 NPM1P18-201ENST00000434232 732 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms