Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
COPB1P53618 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
COPB1P53618 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
COPB1P53618 SNORD115-48-201ENST00000364764 76 ntBASIC5.97□□□□□ -1.45
COPB1P53618 RN7SKP206-201ENST00000410823 293 ntBASIC5.97□□□□□ -1.45
COPB1P53618 AC016769.2-201ENST00000414815 475 ntBASIC5.97□□□□□ -1.45
COPB1P53618 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.97□□□□□ -1.45
COPB1P53618 MTCO2P1-201ENST00000424648 477 ntBASIC5.97□□□□□ -1.45
COPB1P53618 AC113412.1-201ENST00000425840 504 ntBASIC5.97□□□□□ -1.45
COPB1P53618 ZNF965P-201ENST00000432501 817 ntBASIC5.97□□□□□ -1.45
COPB1P53618 OR6D1P-201ENST00000436165 939 ntBASIC5.97□□□□□ -1.45
COPB1P53618 AP006222.1-205ENST00000450734 457 ntBASIC5.97□□□□□ -1.45
COPB1P53618 CABYRP1-201ENST00000465493 1045 ntBASIC5.97□□□□□ -1.45
COPB1P53618 AP000797.2-201ENST00000475768 606 ntBASIC5.97□□□□□ -1.45
COPB1P53618 AC012123.2-201ENST00000485809 248 ntBASIC5.97□□□□□ -1.45
COPB1P53618 PCNAP1-201ENST00000505363 709 ntBASIC5.97□□□□□ -1.45
COPB1P53618 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.97□□□□□ -1.45
COPB1P53618 AC016559.2-201ENST00000510759 359 ntBASIC5.97□□□□□ -1.45
COPB1P53618 AC109464.1-201ENST00000511091 819 ntBASIC5.97□□□□□ -1.45
COPB1P53618 AC098976.1-201ENST00000513014 541 ntBASIC5.97□□□□□ -1.45
COPB1P53618 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.97□□□□□ -1.45
COPB1P53618 AC060775.1-201ENST00000518241 520 ntBASIC5.97□□□□□ -1.45
COPB1P53618 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.97□□□□□ -1.45
COPB1P53618 TRIM77BP-201ENST00000524985 1119 ntBASIC5.97□□□□□ -1.45
COPB1P53618 AC027369.5-201ENST00000533838 755 ntBASIC5.97□□□□□ -1.45
COPB1P53618 AL359219.2-201ENST00000555184 348 ntBASIC5.97□□□□□ -1.45
COPB1P53618 NMNAT1P5-201ENST00000559657 841 ntBASIC5.97□□□□□ -1.45
COPB1P53618 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.97□□□□□ -1.45
COPB1P53618 MTCYBP13-201ENST00000578634 1093 ntBASIC5.97□□□□□ -1.45
COPB1P53618 MIMT1-201ENST00000597105 1050 ntBASIC5.97□□□□□ -1.45
COPB1P53618 AL133247.2-201ENST00000603236 482 ntBASIC5.97□□□□□ -1.45
COPB1P53618 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.97□□□□□ -1.45
COPB1P53618 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COPB1P53618 AC004808.1-201ENST00000627671 721 ntBASIC5.97□□□□□ -1.45
COPB1P53618 KARSP1-201ENST00000451871 1752 ntBASIC5.97□□□□□ -1.45
COPB1P53618 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.97□□□□□ -1.45
COPB1P53618 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.97□□□□□ -1.45
COPB1P53618 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
COPB1P53618 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
COPB1P53618 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COPB1P53618 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
COPB1P53618 AL022311.1-201ENST00000623726 19416 ntBASIC5.96□□□□□ -1.45
COPB1P53618 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
COPB1P53618 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COPB1P53618 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
COPB1P53618 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
COPB1P53618 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.96□□□□□ -1.46
COPB1P53618 MIR375-201ENST00000362103 64 ntBASIC5.96□□□□□ -1.46
COPB1P53618 MIR323A-201ENST00000362199 86 ntBASIC5.96□□□□□ -1.46
COPB1P53618 U3.7-201ENST00000363668 216 ntBASIC5.96□□□□□ -1.46
COPB1P53618 RN7SKP81-201ENST00000365603 331 ntBASIC5.96□□□□□ -1.46
COPB1P53618 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.96□□□□□ -1.46
COPB1P53618 MIR551A-201ENST00000385042 96 ntBASIC5.96□□□□□ -1.46
COPB1P53618 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
COPB1P53618 RNU6-1000P-201ENST00000391066 106 ntBASIC5.96□□□□□ -1.46
COPB1P53618 NPM1P26-201ENST00000426339 738 ntBASIC5.96□□□□□ -1.46
COPB1P53618 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.96□□□□□ -1.46
COPB1P53618 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.96□□□□□ -1.46
COPB1P53618 AL391987.1-201ENST00000441025 200 ntBASIC5.96□□□□□ -1.46
COPB1P53618 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.96□□□□□ -1.46
COPB1P53618 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.96□□□□□ -1.46
COPB1P53618 HLA-DPA3-207ENST00000454398 229 ntBASIC5.96□□□□□ -1.46
COPB1P53618 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.96□□□□□ -1.46
COPB1P53618 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.96□□□□□ -1.46
COPB1P53618 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.96□□□□□ -1.46
COPB1P53618 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.96□□□□□ -1.46
COPB1P53618 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.96□□□□□ -1.46
COPB1P53618 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.96□□□□□ -1.46
COPB1P53618 MTND1P24-201ENST00000552175 861 ntBASIC5.96□□□□□ -1.46
COPB1P53618 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.96□□□□□ -1.46
COPB1P53618 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.96□□□□□ -1.46
COPB1P53618 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.96□□□□□ -1.46
COPB1P53618 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.96□□□□□ -1.46
COPB1P53618 BNIP3P38-201ENST00000601117 544 ntBASIC5.96□□□□□ -1.46
COPB1P53618 AC091057.3-201ENST00000602684 733 ntBASIC5.96□□□□□ -1.46
COPB1P53618 LSM1P2-201ENST00000604911 322 ntBASIC5.96□□□□□ -1.46
COPB1P53618 AC013244.3-201ENST00000605614 388 ntBASIC5.96□□□□□ -1.46
COPB1P53618 AP005431.1-201ENST00000618479 319 ntBASIC5.96□□□□□ -1.46
COPB1P53618 AC079298.2-201ENST00000623885 459 ntBASIC5.96□□□□□ -1.46
COPB1P53618 AC099654.6-201ENST00000636487 512 ntBASIC5.96□□□□□ -1.46
COPB1P53618 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COPB1P53618 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COPB1P53618 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.96□□□□□ -1.46
COPB1P53618 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
COPB1P53618 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.96□□□□□ -1.46
COPB1P53618 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COPB1P53618 CUL4AP1-201ENST00000514750 1863 ntBASIC5.96□□□□□ -1.46
COPB1P53618 AL645568.2-201ENST00000432815 1337 ntBASIC5.96□□□□□ -1.46
COPB1P53618 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
COPB1P53618 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COPB1P53618 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COPB1P53618 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.95□□□□□ -1.46
COPB1P53618 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COPB1P53618 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
COPB1P53618 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COPB1P53618 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
COPB1P53618 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COPB1P53618 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COPB1P53618 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
COPB1P53618 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms