Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUP98P52948 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUP98P52948 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.18□□□□□ -1.42
NUP98P52948 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUP98P52948 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.18□□□□□ -1.42
NUP98P52948 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NUP98P52948 ELOCP19-201ENST00000411919 318 ntBASIC6.18□□□□□ -1.42
NUP98P52948 GSTA7P-201ENST00000438425 448 ntBASIC6.18□□□□□ -1.42
NUP98P52948 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.18□□□□□ -1.42
NUP98P52948 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.18□□□□□ -1.42
NUP98P52948 AC009220.1-201ENST00000451614 275 ntBASIC6.18□□□□□ -1.42
NUP98P52948 AC234781.3-201ENST00000452540 973 ntBASIC6.18□□□□□ -1.42
NUP98P52948 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.18□□□□□ -1.42
NUP98P52948 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.18□□□□□ -1.42
NUP98P52948 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NUP98P52948 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NUP98P52948 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.18□□□□□ -1.42
NUP98P52948 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NUP98P52948 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NUP98P52948 AC068446.1-201ENST00000556425 1549 ntBASIC6.17□□□□□ -1.42
NUP98P52948 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NUP98P52948 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
NUP98P52948 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NUP98P52948 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.17□□□□□ -1.42
NUP98P52948 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NUP98P52948 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NUP98P52948 TBCAP2-201ENST00000416175 326 ntBASIC6.17□□□□□ -1.42
NUP98P52948 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.17□□□□□ -1.42
NUP98P52948 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.17□□□□□ -1.42
NUP98P52948 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.17□□□□□ -1.42
NUP98P52948 RPS23P7-201ENST00000466210 444 ntBASIC6.17□□□□□ -1.42
NUP98P52948 ENPP7P11-201ENST00000505915 627 ntBASIC6.17□□□□□ -1.42
NUP98P52948 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.17□□□□□ -1.42
NUP98P52948 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.17□□□□□ -1.42
NUP98P52948 RN7SL802P-201ENST00000577858 299 ntBASIC6.17□□□□□ -1.42
NUP98P52948 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.17□□□□□ -1.42
NUP98P52948 PRPF19P1-201ENST00000584766 898 ntBASIC6.17□□□□□ -1.42
NUP98P52948 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.17□□□□□ -1.42
NUP98P52948 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.17□□□□□ -1.42
NUP98P52948 AC073869.10-201ENST00000642016 354 ntBASIC6.17□□□□□ -1.42
NUP98P52948 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
NUP98P52948 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NUP98P52948 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
NUP98P52948 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NUP98P52948 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NUP98P52948 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
NUP98P52948 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
NUP98P52948 AL442639.1-201ENST00000625030 1899 ntBASIC6.17□□□□□ -1.42
NUP98P52948 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.17□□□□□ -1.42
NUP98P52948 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NUP98P52948 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
NUP98P52948 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NUP98P52948 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NUP98P52948 KARSP3-201ENST00000571212 1504 ntBASIC6.16□□□□□ -1.42
NUP98P52948 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.16□□□□□ -1.42
NUP98P52948 DNAJC19P7-201ENST00000428811 344 ntBASIC6.16□□□□□ -1.42
NUP98P52948 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.16□□□□□ -1.42
NUP98P52948 OR1H1P-201ENST00000448731 937 ntBASIC6.16□□□□□ -1.42
NUP98P52948 GAPDHP14-201ENST00000450472 937 ntBASIC6.16□□□□□ -1.42
NUP98P52948 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC6.16□□□□□ -1.42
NUP98P52948 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.16□□□□□ -1.42
NUP98P52948 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.16□□□□□ -1.42
NUP98P52948 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NUP98P52948 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
NUP98P52948 AL137100.1-201ENST00000556703 1620 ntBASIC6.16□□□□□ -1.42
NUP98P52948 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NUP98P52948 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
NUP98P52948 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.16□□□□□ -1.42
NUP98P52948 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NUP98P52948 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NUP98P52948 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.16□□□□□ -1.42
NUP98P52948 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
NUP98P52948 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
NUP98P52948 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.15□□□□□ -1.42
NUP98P52948 QRSL1P2-201ENST00000418582 964 ntBASIC6.15□□□□□ -1.42
NUP98P52948 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.15□□□□□ -1.42
NUP98P52948 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC6.15□□□□□ -1.42
NUP98P52948 PRPF38AP1-201ENST00000451976 933 ntBASIC6.15□□□□□ -1.42
NUP98P52948 AC079168.2-201ENST00000453977 416 ntBASIC6.15□□□□□ -1.42
NUP98P52948 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.15□□□□□ -1.42
NUP98P52948 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.15□□□□□ -1.42
NUP98P52948 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.15□□□□□ -1.42
NUP98P52948 NDUFB4P11-201ENST00000560510 395 ntBASIC6.15□□□□□ -1.42
NUP98P52948 AC021422.1-201ENST00000621212 473 ntBASIC6.15□□□□□ -1.42
NUP98P52948 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NUP98P52948 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
NUP98P52948 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.15□□□□□ -1.42
NUP98P52948 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NUP98P52948 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
NUP98P52948 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.15□□□□□ -1.42
NUP98P52948 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
NUP98P52948 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NUP98P52948 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NUP98P52948 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NUP98P52948 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NUP98P52948 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
NUP98P52948 SMG1P7-201ENST00000565246 2704 ntBASIC6.15□□□□□ -1.43
NUP98P52948 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NUP98P52948 RNA5SP453-201ENST00000362503 119 ntBASIC6.15□□□□□ -1.43
NUP98P52948 RNA5SP241-201ENST00000391326 114 ntBASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms