Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
TNFSF9P41273 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
TNFSF9P41273 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.46□□□□□ -1.53
TNFSF9P41273 INTS6P1-201ENST00000504674 2530 ntBASIC5.46□□□□□ -1.53
TNFSF9P41273 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
TNFSF9P41273 IRF5P1-201ENST00000504852 2164 ntBASIC5.46□□□□□ -1.53
TNFSF9P41273 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.46□□□□□ -1.53
TNFSF9P41273 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.46□□□□□ -1.54
TNFSF9P41273 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TNFSF9P41273 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TNFSF9P41273 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TNFSF9P41273 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TNFSF9P41273 SNORA70.10-201ENST00000384515 134 ntBASIC5.46□□□□□ -1.54
TNFSF9P41273 AL133270.1-201ENST00000402635 279 ntBASIC5.46□□□□□ -1.54
TNFSF9P41273 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.46□□□□□ -1.54
TNFSF9P41273 COX6CP13-201ENST00000428703 226 ntBASIC5.46□□□□□ -1.54
TNFSF9P41273 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.46□□□□□ -1.54
TNFSF9P41273 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.46□□□□□ -1.54
TNFSF9P41273 CBX1P2-201ENST00000453841 458 ntBASIC5.46□□□□□ -1.54
TNFSF9P41273 AC091685.2-201ENST00000454924 864 ntBASIC5.46□□□□□ -1.54
TNFSF9P41273 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.46□□□□□ -1.54
TNFSF9P41273 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.46□□□□□ -1.54
TNFSF9P41273 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.46□□□□□ -1.54
TNFSF9P41273 NDUFB5P1-201ENST00000508134 564 ntBASIC5.46□□□□□ -1.54
TNFSF9P41273 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.46□□□□□ -1.54
TNFSF9P41273 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TNFSF9P41273 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.46□□□□□ -1.54
TNFSF9P41273 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.46□□□□□ -1.54
TNFSF9P41273 AC011840.5-201ENST00000582125 771 ntBASIC5.46□□□□□ -1.54
TNFSF9P41273 EIF1P5-201ENST00000585002 234 ntBASIC5.46□□□□□ -1.54
TNFSF9P41273 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.46□□□□□ -1.54
TNFSF9P41273 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.46□□□□□ -1.54
TNFSF9P41273 AC091905.4-201ENST00000623432 202 ntBASIC5.46□□□□□ -1.54
TNFSF9P41273 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.46□□□□□ -1.54
TNFSF9P41273 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TNFSF9P41273 OR4G1P-202ENST00000641173 1788 ntBASIC5.46□□□□□ -1.54
TNFSF9P41273 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TNFSF9P41273 MIPEPP2-201ENST00000422560 1819 ntBASIC5.46□□□□□ -1.54
TNFSF9P41273 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.46□□□□□ -1.54
TNFSF9P41273 AL132656.3-201ENST00000606384 1595 ntBASIC5.46□□□□□ -1.54
TNFSF9P41273 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TNFSF9P41273 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
TNFSF9P41273 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFSF9P41273 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF9P41273 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TNFSF9P41273 AC063976.2-201ENST00000425667 3556 ntBASIC5.45□□□□□ -1.54
TNFSF9P41273 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
TNFSF9P41273 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFSF9P41273 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFSF9P41273 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFSF9P41273 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TNFSF9P41273 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF9P41273 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
TNFSF9P41273 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF9P41273 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.45□□□□□ -1.54
TNFSF9P41273 TRAV35-201ENST00000390462 330 ntBASIC5.45□□□□□ -1.54
TNFSF9P41273 ATP5HP3-201ENST00000396994 486 ntBASIC5.45□□□□□ -1.54
TNFSF9P41273 COX5BP7-201ENST00000414780 274 ntBASIC5.45□□□□□ -1.54
TNFSF9P41273 CHEK2P3-201ENST00000416118 248 ntBASIC5.45□□□□□ -1.54
TNFSF9P41273 AF186996.5-201ENST00000418098 904 ntBASIC5.45□□□□□ -1.54
TNFSF9P41273 AL772161.1-201ENST00000439130 476 ntBASIC5.45□□□□□ -1.54
TNFSF9P41273 RPS29P9-201ENST00000440360 171 ntBASIC5.45□□□□□ -1.54
TNFSF9P41273 TXNP5-201ENST00000441043 315 ntBASIC5.45□□□□□ -1.54
TNFSF9P41273 OR7E125P-201ENST00000443450 846 ntBASIC5.45□□□□□ -1.54
TNFSF9P41273 AL137845.2-201ENST00000444292 988 ntBASIC5.45□□□□□ -1.54
TNFSF9P41273 HMGB1P4-201ENST00000455362 567 ntBASIC5.45□□□□□ -1.54
TNFSF9P41273 AC140172.1-201ENST00000502928 141 ntBASIC5.45□□□□□ -1.54
TNFSF9P41273 BTF3P13-201ENST00000513224 490 ntBASIC5.45□□□□□ -1.54
TNFSF9P41273 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.45□□□□□ -1.54
TNFSF9P41273 AC005000.1-201ENST00000536192 288 ntBASIC5.45□□□□□ -1.54
TNFSF9P41273 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF9P41273 AC040958.1-201ENST00000561102 201 ntBASIC5.45□□□□□ -1.54
TNFSF9P41273 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFSF9P41273 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFSF9P41273 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.45□□□□□ -1.54
TNFSF9P41273 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.45□□□□□ -1.54
TNFSF9P41273 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.45□□□□□ -1.54
TNFSF9P41273 AC087385.3-201ENST00000620477 187 ntBASIC5.45□□□□□ -1.54
TNFSF9P41273 AL445528.2-201ENST00000620582 470 ntBASIC5.45□□□□□ -1.54
TNFSF9P41273 AL353684.1-201ENST00000622677 1120 ntBASIC5.45□□□□□ -1.54
TNFSF9P41273 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
TNFSF9P41273 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFSF9P41273 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF9P41273 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF9P41273 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF9P41273 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TNFSF9P41273 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
TNFSF9P41273 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TNFSF9P41273 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF9P41273 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.45□□□□□ -1.54
TNFSF9P41273 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TNFSF9P41273 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.45□□□□□ -1.54
TNFSF9P41273 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.44□□□□□ -1.54
TNFSF9P41273 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
TNFSF9P41273 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TNFSF9P41273 AC005261.2-201ENST00000593427 4258 ntBASIC5.44□□□□□ -1.54
TNFSF9P41273 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
TNFSF9P41273 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.44□□□□□ -1.54
TNFSF9P41273 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TNFSF9P41273 OR2AM1P-201ENST00000422137 422 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms