Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.09□□□□□ -1.59
RORAP35398 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.09□□□□□ -1.59
RORAP35398 AC002553.2-201ENST00000453217 340 ntBASIC5.09□□□□□ -1.59
RORAP35398 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.09□□□□□ -1.59
RORAP35398 RN7SL197P-201ENST00000466981 299 ntBASIC5.09□□□□□ -1.59
RORAP35398 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RORAP35398 BX284632.1-201ENST00000478218 541 ntBASIC5.09□□□□□ -1.59
RORAP35398 RN7SL826P-201ENST00000479724 288 ntBASIC5.09□□□□□ -1.59
RORAP35398 RPSAP50-201ENST00000481955 852 ntBASIC5.09□□□□□ -1.59
RORAP35398 OR11I1P-201ENST00000486033 954 ntBASIC5.09□□□□□ -1.59
RORAP35398 AC231760.1-201ENST00000498002 260 ntBASIC5.09□□□□□ -1.59
RORAP35398 NDUFA5P12-201ENST00000503796 343 ntBASIC5.09□□□□□ -1.59
RORAP35398 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.09□□□□□ -1.59
RORAP35398 AC091912.1-201ENST00000511351 248 ntBASIC5.09□□□□□ -1.59
RORAP35398 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.09□□□□□ -1.59
RORAP35398 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.09□□□□□ -1.59
RORAP35398 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.09□□□□□ -1.59
RORAP35398 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.09□□□□□ -1.59
RORAP35398 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
RORAP35398 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.09□□□□□ -1.59
RORAP35398 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RORAP35398 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
RORAP35398 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.09□□□□□ -1.59
RORAP35398 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.09□□□□□ -1.59
RORAP35398 BNIP3P32-201ENST00000600015 554 ntBASIC5.09□□□□□ -1.59
RORAP35398 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.09□□□□□ -1.59
RORAP35398 TAS2R6P-201ENST00000605022 826 ntBASIC5.09□□□□□ -1.59
RORAP35398 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.09□□□□□ -1.59
RORAP35398 AL161912.3-201ENST00000605404 628 ntBASIC5.09□□□□□ -1.59
RORAP35398 BNIP3P41-202ENST00000616656 861 ntBASIC5.09□□□□□ -1.59
RORAP35398 AF117829.2-201ENST00000619538 361 ntBASIC5.09□□□□□ -1.59
RORAP35398 AC073869.8-201ENST00000641806 335 ntBASIC5.09□□□□□ -1.59
RORAP35398 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.09□□□□□ -1.59
RORAP35398 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RORAP35398 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.09□□□□□ -1.59
RORAP35398 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
RORAP35398 AC104260.2-201ENST00000623551 3497 ntBASIC5.09□□□□□ -1.59
RORAP35398 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RORAP35398 AC027228.2-201ENST00000567141 2154 ntBASIC5.09□□□□□ -1.59
RORAP35398 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RORAP35398 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.09□□□□□ -1.6
RORAP35398 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
RORAP35398 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RORAP35398 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.09□□□□□ -1.6
RORAP35398 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.09□□□□□ -1.6
RORAP35398 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RORAP35398 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RORAP35398 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.08□□□□□ -1.6
RORAP35398 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.08□□□□□ -1.6
RORAP35398 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RORAP35398 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.08□□□□□ -1.6
RORAP35398 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.08□□□□□ -1.6
RORAP35398 AL606537.1-201ENST00000607258 2011 ntBASIC5.08□□□□□ -1.6
RORAP35398 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.08□□□□□ -1.6
RORAP35398 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
RORAP35398 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RORAP35398 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RORAP35398 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RORAP35398 OR6C64P-201ENST00000419708 825 ntBASIC5.08□□□□□ -1.6
RORAP35398 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.08□□□□□ -1.6
RORAP35398 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.08□□□□□ -1.6
RORAP35398 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.08□□□□□ -1.6
RORAP35398 AC023271.1-201ENST00000445936 1090 ntBASIC5.08□□□□□ -1.6
RORAP35398 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.08□□□□□ -1.6
RORAP35398 CBX1P2-201ENST00000453841 458 ntBASIC5.08□□□□□ -1.6
RORAP35398 ABCC13-202ENST00000463099 3842 ntBASIC5.08□□□□□ -1.6
RORAP35398 RPL7AP6-201ENST00000477943 801 ntBASIC5.08□□□□□ -1.6
RORAP35398 RPL7AP10-201ENST00000481016 791 ntBASIC5.08□□□□□ -1.6
RORAP35398 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
RORAP35398 OR9N1P-201ENST00000491296 333 ntBASIC5.08□□□□□ -1.6
RORAP35398 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.08□□□□□ -1.6
RORAP35398 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.08□□□□□ -1.6
RORAP35398 RNU6-943P-201ENST00000516960 98 ntBASIC5.08□□□□□ -1.6
RORAP35398 RNA5SP373-201ENST00000517271 95 ntBASIC5.08□□□□□ -1.6
RORAP35398 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.08□□□□□ -1.6
RORAP35398 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.08□□□□□ -1.6
RORAP35398 AC127381.1-201ENST00000555979 939 ntBASIC5.08□□□□□ -1.6
RORAP35398 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.08□□□□□ -1.6
RORAP35398 MIR3691-201ENST00000578066 90 ntBASIC5.08□□□□□ -1.6
RORAP35398 RN7SL356P-201ENST00000582228 248 ntBASIC5.08□□□□□ -1.6
RORAP35398 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.08□□□□□ -1.6
RORAP35398 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RORAP35398 AP000769.2-201ENST00000602344 396 ntBASIC5.08□□□□□ -1.6
RORAP35398 AC008536.1-201ENST00000602872 669 ntBASIC5.08□□□□□ -1.6
RORAP35398 AC015849.6-201ENST00000605454 474 ntBASIC5.08□□□□□ -1.6
RORAP35398 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RORAP35398 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.08□□□□□ -1.6
RORAP35398 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RORAP35398 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RORAP35398 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.08□□□□□ -1.6
RORAP35398 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.08□□□□□ -1.6
RORAP35398 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RORAP35398 AL022322.2-201ENST00000624072 20397 ntBASIC5.08□□□□□ -1.6
RORAP35398 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RORAP35398 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RORAP35398 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
RORAP35398 AL359715.3-201ENST00000569267 2123 ntBASIC5.08□□□□□ -1.6
RORAP35398 SOCS5P3-201ENST00000425115 1576 ntBASIC5.08□□□□□ -1.6
RORAP35398 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.07□□□□□ -1.6
RORAP35398 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms