Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC092451.3-201ENST00000625067 1343 ntBASIC4.91□□□□□ -1.62
COL5A1P20908 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL5A1P20908 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
COL5A1P20908 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL5A1P20908 CASC19-260ENST00000641828 2001 ntBASIC4.91□□□□□ -1.62
COL5A1P20908 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL5A1P20908 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL5A1P20908 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL5A1P20908 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL5A1P20908 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.91□□□□□ -1.62
COL5A1P20908 Z97832.1-201ENST00000402490 328 ntBASIC4.91□□□□□ -1.62
COL5A1P20908 RN7SKP114-201ENST00000410327 279 ntBASIC4.91□□□□□ -1.62
COL5A1P20908 RPL7AP49-201ENST00000429522 581 ntBASIC4.91□□□□□ -1.62
COL5A1P20908 AL591438.1-201ENST00000433508 581 ntBASIC4.91□□□□□ -1.62
COL5A1P20908 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.91□□□□□ -1.62
COL5A1P20908 AC090804.1-201ENST00000448870 490 ntBASIC4.91□□□□□ -1.62
COL5A1P20908 SLC25A18P1-201ENST00000449385 454 ntBASIC4.91□□□□□ -1.62
COL5A1P20908 ENPP7P9-201ENST00000514456 627 ntBASIC4.91□□□□□ -1.62
COL5A1P20908 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.91□□□□□ -1.62
COL5A1P20908 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.91□□□□□ -1.62
COL5A1P20908 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.91□□□□□ -1.62
COL5A1P20908 CCDC58P3-201ENST00000590792 430 ntBASIC4.91□□□□□ -1.62
COL5A1P20908 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.91□□□□□ -1.62
COL5A1P20908 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.91□□□□□ -1.62
COL5A1P20908 AP001521.2-201ENST00000608772 546 ntBASIC4.91□□□□□ -1.62
COL5A1P20908 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.91□□□□□ -1.62
COL5A1P20908 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.91□□□□□ -1.62
COL5A1P20908 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
COL5A1P20908 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
COL5A1P20908 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL5A1P20908 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
COL5A1P20908 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL5A1P20908 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL5A1P20908 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.91□□□□□ -1.62
COL5A1P20908 AC004158.1-201ENST00000564508 4319 ntBASIC4.91□□□□□ -1.62
COL5A1P20908 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.91□□□□□ -1.62
COL5A1P20908 AC104964.3-201ENST00000606115 2860 ntBASIC4.91□□□□□ -1.62
COL5A1P20908 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
COL5A1P20908 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
COL5A1P20908 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.91□□□□□ -1.62
COL5A1P20908 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.91□□□□□ -1.62
COL5A1P20908 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
COL5A1P20908 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL5A1P20908 SNORA77-201ENST00000408716 125 ntBASIC4.9□□□□□ -1.62
COL5A1P20908 AC114755.2-201ENST00000413520 361 ntBASIC4.9□□□□□ -1.62
COL5A1P20908 AC009480.2-201ENST00000422916 432 ntBASIC4.9□□□□□ -1.62
COL5A1P20908 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.9□□□□□ -1.62
COL5A1P20908 RPL5P2-201ENST00000429598 854 ntBASIC4.9□□□□□ -1.62
COL5A1P20908 RN7SL41P-201ENST00000476144 297 ntBASIC4.9□□□□□ -1.62
COL5A1P20908 AC010350.1-201ENST00000504908 231 ntBASIC4.9□□□□□ -1.62
COL5A1P20908 AC021193.1-201ENST00000511607 420 ntBASIC4.9□□□□□ -1.62
COL5A1P20908 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.9□□□□□ -1.62
COL5A1P20908 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC4.9□□□□□ -1.62
COL5A1P20908 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.9□□□□□ -1.62
COL5A1P20908 MIR3160-1-201ENST00000577972 85 ntBASIC4.9□□□□□ -1.62
COL5A1P20908 MIR4277-201ENST00000578298 84 ntBASIC4.9□□□□□ -1.62
COL5A1P20908 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.9□□□□□ -1.62
COL5A1P20908 AC010857.1-201ENST00000606398 594 ntBASIC4.9□□□□□ -1.62
COL5A1P20908 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.9□□□□□ -1.62
COL5A1P20908 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.9□□□□□ -1.62
COL5A1P20908 AC026367.3-201ENST00000619032 590 ntBASIC4.9□□□□□ -1.62
COL5A1P20908 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.9□□□□□ -1.62
COL5A1P20908 DNM1P47-203ENST00000571780 12667 ntBASIC4.9□□□□□ -1.62
COL5A1P20908 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC4.9□□□□□ -1.62
COL5A1P20908 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.9□□□□□ -1.63
COL5A1P20908 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL5A1P20908 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL5A1P20908 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL5A1P20908 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL5A1P20908 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL5A1P20908 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL5A1P20908 CCAT2-201ENST00000630920 1752 ntBASIC4.9□□□□□ -1.63
COL5A1P20908 AL132640.2-201ENST00000559968 1698 ntBASIC4.9□□□□□ -1.63
COL5A1P20908 AC092681.1-201ENST00000297369 291 ntBASIC4.9□□□□□ -1.63
COL5A1P20908 RPL17P50-201ENST00000396131 546 ntBASIC4.9□□□□□ -1.63
COL5A1P20908 RPS27AP7-201ENST00000422792 455 ntBASIC4.9□□□□□ -1.63
COL5A1P20908 CHIAP3-201ENST00000423668 1133 ntBASIC4.9□□□□□ -1.63
COL5A1P20908 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.9□□□□□ -1.63
COL5A1P20908 BX323845.1-201ENST00000432417 179 ntBASIC4.9□□□□□ -1.63
COL5A1P20908 NPM1P18-201ENST00000434232 732 ntBASIC4.9□□□□□ -1.63
COL5A1P20908 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.9□□□□□ -1.63
COL5A1P20908 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.9□□□□□ -1.63
COL5A1P20908 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.9□□□□□ -1.63
COL5A1P20908 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.9□□□□□ -1.63
COL5A1P20908 MIR4675-201ENST00000577898 77 ntBASIC4.9□□□□□ -1.63
COL5A1P20908 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.9□□□□□ -1.63
COL5A1P20908 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.9□□□□□ -1.63
COL5A1P20908 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.9□□□□□ -1.63
COL5A1P20908 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.9□□□□□ -1.63
COL5A1P20908 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.9□□□□□ -1.63
COL5A1P20908 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.9□□□□□ -1.63
COL5A1P20908 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL5A1P20908 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL5A1P20908 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC4.9□□□□□ -1.63
COL5A1P20908 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
COL5A1P20908 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL5A1P20908 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL5A1P20908 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
COL5A1P20908 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.89□□□□□ -1.63
COL5A1P20908 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms