Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRT3P12035 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.51□□□□□ -1.53
KRT3P12035 AC002524.1-201ENST00000411687 547 ntBASIC5.51□□□□□ -1.53
KRT3P12035 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.51□□□□□ -1.53
KRT3P12035 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.51□□□□□ -1.53
KRT3P12035 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.51□□□□□ -1.53
KRT3P12035 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.51□□□□□ -1.53
KRT3P12035 AC108161.1-201ENST00000461060 402 ntBASIC5.51□□□□□ -1.53
KRT3P12035 AL049874.2-201ENST00000492636 288 ntBASIC5.51□□□□□ -1.53
KRT3P12035 RN7SL101P-201ENST00000496350 279 ntBASIC5.51□□□□□ -1.53
KRT3P12035 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.51□□□□□ -1.53
KRT3P12035 AC008126.1-201ENST00000549019 480 ntBASIC5.51□□□□□ -1.53
KRT3P12035 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRT3P12035 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.51□□□□□ -1.53
KRT3P12035 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRT3P12035 AC012146.2-201ENST00000576545 416 ntBASIC5.51□□□□□ -1.53
KRT3P12035 FKBP1AP1-201ENST00000594588 318 ntBASIC5.51□□□□□ -1.53
KRT3P12035 AC011445.2-201ENST00000599274 173 ntBASIC5.51□□□□□ -1.53
KRT3P12035 MIR6837-201ENST00000620884 64 ntBASIC5.51□□□□□ -1.53
KRT3P12035 CYP4F35P-202ENST00000636121 390 ntBASIC5.51□□□□□ -1.53
KRT3P12035 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.51□□□□□ -1.53
KRT3P12035 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
KRT3P12035 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.51□□□□□ -1.53
KRT3P12035 AC006210.2-201ENST00000367074 1545 ntBASIC5.51□□□□□ -1.53
KRT3P12035 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
KRT3P12035 AC027279.1-201ENST00000568885 4284 ntBASIC5.51□□□□□ -1.53
KRT3P12035 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRT3P12035 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.51□□□□□ -1.53
KRT3P12035 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRT3P12035 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.5□□□□□ -1.53
KRT3P12035 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRT3P12035 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRT3P12035 MTND5P23-201ENST00000430812 1655 ntBASIC5.5□□□□□ -1.53
KRT3P12035 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.5□□□□□ -1.53
KRT3P12035 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
KRT3P12035 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.5□□□□□ -1.53
KRT3P12035 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
KRT3P12035 RNA5SP435-201ENST00000364044 108 ntBASIC5.5□□□□□ -1.53
KRT3P12035 RNA5SP223-201ENST00000365174 120 ntBASIC5.5□□□□□ -1.53
KRT3P12035 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRT3P12035 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.5□□□□□ -1.53
KRT3P12035 RNU1-74P-201ENST00000384108 171 ntBASIC5.5□□□□□ -1.53
KRT3P12035 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
KRT3P12035 U3.25-201ENST00000391209 220 ntBASIC5.5□□□□□ -1.53
KRT3P12035 MTND4LP21-201ENST00000415303 295 ntBASIC5.5□□□□□ -1.53
KRT3P12035 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRT3P12035 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.5□□□□□ -1.53
KRT3P12035 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.5□□□□□ -1.53
KRT3P12035 YY1P1-201ENST00000427625 668 ntBASIC5.5□□□□□ -1.53
KRT3P12035 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.5□□□□□ -1.53
KRT3P12035 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.5□□□□□ -1.53
KRT3P12035 PRPF38AP1-201ENST00000451976 933 ntBASIC5.5□□□□□ -1.53
KRT3P12035 RPS4XP12-201ENST00000461747 709 ntBASIC5.5□□□□□ -1.53
KRT3P12035 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
KRT3P12035 EIF3LP3-201ENST00000495197 822 ntBASIC5.5□□□□□ -1.53
KRT3P12035 RPS4XP20-201ENST00000505751 772 ntBASIC5.5□□□□□ -1.53
KRT3P12035 AC012400.1-201ENST00000518452 381 ntBASIC5.5□□□□□ -1.53
KRT3P12035 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.5□□□□□ -1.53
KRT3P12035 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.5□□□□□ -1.53
KRT3P12035 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.5□□□□□ -1.53
KRT3P12035 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.5□□□□□ -1.53
KRT3P12035 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.5□□□□□ -1.53
KRT3P12035 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.5□□□□□ -1.53
KRT3P12035 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
KRT3P12035 AC022884.2-201ENST00000578535 580 ntBASIC5.5□□□□□ -1.53
KRT3P12035 PRPF19P1-201ENST00000584766 898 ntBASIC5.5□□□□□ -1.53
KRT3P12035 AC069307.1-201ENST00000602820 447 ntBASIC5.5□□□□□ -1.53
KRT3P12035 AC109309.2-201ENST00000612597 332 ntBASIC5.5□□□□□ -1.53
KRT3P12035 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.5□□□□□ -1.53
KRT3P12035 CASC19-264ENST00000641912 1184 ntBASIC5.5□□□□□ -1.53
KRT3P12035 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.5□□□□□ -1.53
KRT3P12035 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRT3P12035 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRT3P12035 SMG1P7-201ENST00000565246 2704 ntBASIC5.5□□□□□ -1.53
KRT3P12035 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.5□□□□□ -1.53
KRT3P12035 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRT3P12035 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRT3P12035 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRT3P12035 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.5□□□□□ -1.53
KRT3P12035 AC022417.1-201ENST00000624768 1303 ntBASIC5.49□□□□□ -1.53
KRT3P12035 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.49□□□□□ -1.53
KRT3P12035 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.49□□□□□ -1.53
KRT3P12035 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
KRT3P12035 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
KRT3P12035 RNA5SP183-201ENST00000362452 119 ntBASIC5.49□□□□□ -1.53
KRT3P12035 RNA5SP90-201ENST00000364801 99 ntBASIC5.49□□□□□ -1.53
KRT3P12035 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.49□□□□□ -1.53
KRT3P12035 AC007618.1-201ENST00000366455 732 ntBASIC5.49□□□□□ -1.53
KRT3P12035 RN7SKP206-201ENST00000410823 293 ntBASIC5.49□□□□□ -1.53
KRT3P12035 COX5BP7-201ENST00000414780 274 ntBASIC5.49□□□□□ -1.53
KRT3P12035 PCNPP4-201ENST00000414817 517 ntBASIC5.49□□□□□ -1.53
KRT3P12035 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.49□□□□□ -1.53
KRT3P12035 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.49□□□□□ -1.53
KRT3P12035 CFL1P1-202ENST00000432948 411 ntBASIC5.49□□□□□ -1.53
KRT3P12035 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.49□□□□□ -1.53
KRT3P12035 RPS29P10-201ENST00000439197 166 ntBASIC5.49□□□□□ -1.53
KRT3P12035 SNRPFP2-201ENST00000440710 251 ntBASIC5.49□□□□□ -1.53
KRT3P12035 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.49□□□□□ -1.53
KRT3P12035 OR6C72P-201ENST00000451403 892 ntBASIC5.49□□□□□ -1.53
KRT3P12035 BX842559.2-201ENST00000451418 605 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms