Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD28P10747 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CD28P10747 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.1□□□□□ -1.75
CD28P10747 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CD28P10747 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.1□□□□□ -1.75
CD28P10747 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD28P10747 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CD28P10747 RN7SKP115-201ENST00000363177 317 ntBASIC4.1□□□□□ -1.75
CD28P10747 RNA5SP123-201ENST00000363244 119 ntBASIC4.1□□□□□ -1.75
CD28P10747 RN7SKP145-201ENST00000363291 303 ntBASIC4.1□□□□□ -1.75
CD28P10747 RNA5SP187-201ENST00000384400 119 ntBASIC4.1□□□□□ -1.75
CD28P10747 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CD28P10747 Y_RNA.625-201ENST00000411256 107 ntBASIC4.1□□□□□ -1.75
CD28P10747 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.1□□□□□ -1.75
CD28P10747 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.1□□□□□ -1.75
CD28P10747 BX119904.3-201ENST00000428194 957 ntBASIC4.1□□□□□ -1.75
CD28P10747 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.1□□□□□ -1.75
CD28P10747 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.1□□□□□ -1.75
CD28P10747 LINC02210-201ENST00000444561 288 ntBASIC4.1□□□□□ -1.75
CD28P10747 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.1□□□□□ -1.75
CD28P10747 HIGD1AP8-201ENST00000453927 274 ntBASIC4.1□□□□□ -1.75
CD28P10747 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.1□□□□□ -1.75
CD28P10747 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.1□□□□□ -1.75
CD28P10747 SUMO2P4-201ENST00000504193 276 ntBASIC4.1□□□□□ -1.75
CD28P10747 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.1□□□□□ -1.75
CD28P10747 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.1□□□□□ -1.75
CD28P10747 CDH12P4-201ENST00000517835 295 ntBASIC4.1□□□□□ -1.75
CD28P10747 CDH12P3-201ENST00000517935 295 ntBASIC4.1□□□□□ -1.75
CD28P10747 CDH12P1-201ENST00000518435 295 ntBASIC4.1□□□□□ -1.75
CD28P10747 AC012400.1-201ENST00000518452 381 ntBASIC4.1□□□□□ -1.75
CD28P10747 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.1□□□□□ -1.75
CD28P10747 AP002373.2-201ENST00000541631 1060 ntBASIC4.1□□□□□ -1.75
CD28P10747 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.1□□□□□ -1.75
CD28P10747 MIR3934-201ENST00000579806 107 ntBASIC4.1□□□□□ -1.75
CD28P10747 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.1□□□□□ -1.75
CD28P10747 AC002069.2-201ENST00000603580 883 ntBASIC4.1□□□□□ -1.75
CD28P10747 AC239803.2-201ENST00000610161 430 ntBASIC4.1□□□□□ -1.75
CD28P10747 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.1□□□□□ -1.75
CD28P10747 AC015660.5-201ENST00000623238 564 ntBASIC4.1□□□□□ -1.75
CD28P10747 AC073342.3-201ENST00000624211 193 ntBASIC4.1□□□□□ -1.75
CD28P10747 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.1□□□□□ -1.75
CD28P10747 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CD28P10747 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD28P10747 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.1□□□□□ -1.75
CD28P10747 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.1□□□□□ -1.75
CD28P10747 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CD28P10747 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CD28P10747 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.1□□□□□ -1.75
CD28P10747 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CD28P10747 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.1□□□□□ -1.75
CD28P10747 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD28P10747 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CD28P10747 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CD28P10747 PROS2P-201ENST00000474651 1951 ntBASIC4.09□□□□□ -1.75
CD28P10747 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
CD28P10747 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD28P10747 SCARNA15-201ENST00000607520 4325 ntBASIC4.09□□□□□ -1.75
CD28P10747 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CD28P10747 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD28P10747 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CD28P10747 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CD28P10747 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.09□□□□□ -1.75
CD28P10747 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.09□□□□□ -1.75
CD28P10747 AC092681.1-201ENST00000297369 291 ntBASIC4.09□□□□□ -1.75
CD28P10747 SNURFL-201ENST00000309296 343 ntBASIC4.09□□□□□ -1.75
CD28P10747 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD28P10747 RNA5SP443-201ENST00000363083 132 ntBASIC4.09□□□□□ -1.75
CD28P10747 U3.28-201ENST00000391249 210 ntBASIC4.09□□□□□ -1.75
CD28P10747 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.09□□□□□ -1.75
CD28P10747 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.09□□□□□ -1.75
CD28P10747 AC244033.1-201ENST00000426826 870 ntBASIC4.09□□□□□ -1.75
CD28P10747 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.09□□□□□ -1.75
CD28P10747 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.09□□□□□ -1.75
CD28P10747 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.09□□□□□ -1.75
CD28P10747 AC073465.2-201ENST00000440938 498 ntBASIC4.09□□□□□ -1.75
CD28P10747 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.09□□□□□ -1.75
CD28P10747 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CD28P10747 AC083982.1-201ENST00000485679 344 ntBASIC4.09□□□□□ -1.75
CD28P10747 AC021106.1-201ENST00000509020 1058 ntBASIC4.09□□□□□ -1.75
CD28P10747 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.09□□□□□ -1.75
CD28P10747 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CD28P10747 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.09□□□□□ -1.75
CD28P10747 AC005000.1-201ENST00000536192 288 ntBASIC4.09□□□□□ -1.75
CD28P10747 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CD28P10747 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.09□□□□□ -1.75
CD28P10747 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.09□□□□□ -1.75
CD28P10747 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.09□□□□□ -1.75
CD28P10747 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.09□□□□□ -1.75
CD28P10747 AC093799.2-201ENST00000610062 578 ntBASIC4.09□□□□□ -1.75
CD28P10747 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.09□□□□□ -1.75
CD28P10747 AC073869.7-201ENST00000640874 297 ntBASIC4.09□□□□□ -1.75
CD28P10747 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CD28P10747 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CD28P10747 AC079097.1-201ENST00000512187 1399 ntBASIC4.09□□□□□ -1.75
CD28P10747 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD28P10747 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CD28P10747 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD28P10747 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CD28P10747 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CD28P10747 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms