Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 SNORA21-201ENST00000362423 132 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 ATP5F1P3-201ENST00000397213 657 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 RPL23AP59-201ENST00000399415 461 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 Z75741.2-201ENST00000417272 1167 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 AL034379.1-201ENST00000423216 253 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 RAC1P8-201ENST00000427086 527 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 AC244035.1-201ENST00000430042 390 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 YWHAZP2-201ENST00000440317 728 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 FGF7P5-201ENST00000441829 291 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 OR52E3P-201ENST00000452083 936 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 AC002553.3-201ENST00000453002 341 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 NECAP1P2-201ENST00000455668 727 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 UCK2-205ENST00000469256 753 ntTSL 3 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 AC079080.1-201ENST00000479841 822 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 RN7SL273P-201ENST00000481561 299 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 AC083906.1-201ENST00000509298 406 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 AC093281.2-201ENST00000510153 597 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 RPL7L1P4-201ENST00000513004 707 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 CASP1-216ENST00000534497 825 ntTSL 5 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 RPA2P1-201ENST00000556557 721 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 AP003117.2-201ENST00000606010 545 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 AL159169.2-201ENST00000610061 1269 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 ANKRD20A17P-201ENST00000511745 1330 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 YES1-203ENST00000577961 4554 ntTSL 5 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 HLF-210ENST00000575345 3589 ntTSL 2 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 UGT2B25P-201ENST00000511504 1586 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AC130360.2-201ENST00000533477 1556 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 OFD1P10Y-201ENST00000434110 1433 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 OR52B3P-201ENST00000314715 928 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 RNU1-87P-201ENST00000363727 170 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AL672167.2-201ENST00000377164 879 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AL096800.1-201ENST00000405326 893 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 RN7SKP273-201ENST00000411392 314 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 USP9YP33-201ENST00000412220 421 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AC097721.1-201ENST00000427150 1253 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 MOB1AP1-201ENST00000430903 535 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 OR2B8P-201ENST00000432841 938 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AL596276.1-201ENST00000434465 418 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 MTCO1P19-201ENST00000443487 500 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 CFL1P4-201ENST00000451536 498 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 RN7SL705P-201ENST00000481678 294 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 CR383658.1-201ENST00000514609 734 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AC022447.1-201ENST00000515358 464 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 TMEM97P2-201ENST00000517841 403 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 MIR3915-201ENST00000578518 97 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AC090616.2-202ENST00000584248 222 ntBASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms