Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RHOT1P3-201ENST00000436571 331 ntBASIC5.96□□□□□ -1.46
HOXC6P09630 XKRYP6-201ENST00000440468 1116 ntBASIC5.96□□□□□ -1.46
HOXC6P09630 XKRYP3-201ENST00000442113 1116 ntBASIC5.96□□□□□ -1.46
HOXC6P09630 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXC6P09630 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
HOXC6P09630 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.96□□□□□ -1.46
HOXC6P09630 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.96□□□□□ -1.46
HOXC6P09630 RN7SKP260-201ENST00000516907 149 ntBASIC5.96□□□□□ -1.46
HOXC6P09630 AC021006.3-201ENST00000530771 192 ntBASIC5.96□□□□□ -1.46
HOXC6P09630 AC025423.2-201ENST00000537570 439 ntBASIC5.96□□□□□ -1.46
HOXC6P09630 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.96□□□□□ -1.46
HOXC6P09630 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.96□□□□□ -1.46
HOXC6P09630 AL731537.2-201ENST00000561565 951 ntBASIC5.96□□□□□ -1.46
HOXC6P09630 AC018552.1-201ENST00000562099 811 ntBASIC5.96□□□□□ -1.46
HOXC6P09630 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.96□□□□□ -1.46
HOXC6P09630 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.96□□□□□ -1.46
HOXC6P09630 AP000919.1-201ENST00000582850 985 ntBASIC5.96□□□□□ -1.46
HOXC6P09630 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.96□□□□□ -1.46
HOXC6P09630 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.96□□□□□ -1.46
HOXC6P09630 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.96□□□□□ -1.46
HOXC6P09630 MIR378J-201ENST00000611988 109 ntBASIC5.96□□□□□ -1.46
HOXC6P09630 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.96□□□□□ -1.46
HOXC6P09630 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXC6P09630 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXC6P09630 AC000095.2-202ENST00000637415 154 ntBASIC5.96□□□□□ -1.46
HOXC6P09630 AL139254.3-201ENST00000641097 674 ntBASIC5.96□□□□□ -1.46
HOXC6P09630 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC6P09630 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXC6P09630 AC004076.2-201ENST00000620532 3323 ntBASIC5.96□□□□□ -1.46
HOXC6P09630 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC6P09630 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC6P09630 AC233968.1-201ENST00000611212 1300 ntBASIC5.96□□□□□ -1.46
HOXC6P09630 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC6P09630 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.96□□□□□ -1.46
HOXC6P09630 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXC6P09630 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC6P09630 CCAT2-201ENST00000630920 1752 ntBASIC5.95□□□□□ -1.46
HOXC6P09630 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC6P09630 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC6P09630 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC6P09630 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HOXC6P09630 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.95□□□□□ -1.46
HOXC6P09630 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.95□□□□□ -1.46
HOXC6P09630 CHEK2P3-201ENST00000416118 248 ntBASIC5.95□□□□□ -1.46
HOXC6P09630 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC6P09630 KATNBL1P2-201ENST00000433311 835 ntBASIC5.95□□□□□ -1.46
HOXC6P09630 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC6P09630 AL136455.1-201ENST00000441083 1240 ntBASIC5.95□□□□□ -1.46
HOXC6P09630 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.95□□□□□ -1.46
HOXC6P09630 AL513533.1-201ENST00000453728 415 ntBASIC5.95□□□□□ -1.46
HOXC6P09630 RN7SL205P-201ENST00000490174 284 ntBASIC5.95□□□□□ -1.46
HOXC6P09630 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.95□□□□□ -1.46
HOXC6P09630 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.95□□□□□ -1.46
HOXC6P09630 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.95□□□□□ -1.46
HOXC6P09630 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC6P09630 RN7SL52P-201ENST00000584271 284 ntBASIC5.95□□□□□ -1.46
HOXC6P09630 GMCL1P2-201ENST00000605230 823 ntBASIC5.95□□□□□ -1.46
HOXC6P09630 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.95□□□□□ -1.46
HOXC6P09630 AL356752.1-201ENST00000615844 593 ntBASIC5.95□□□□□ -1.46
HOXC6P09630 RN7SL722P-201ENST00000617780 284 ntBASIC5.95□□□□□ -1.46
HOXC6P09630 RN7SL565P-201ENST00000618246 284 ntBASIC5.95□□□□□ -1.46
HOXC6P09630 MIR7641-1-201ENST00000627518 61 ntBASIC5.95□□□□□ -1.46
HOXC6P09630 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
HOXC6P09630 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC6P09630 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC6P09630 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.95□□□□□ -1.46
HOXC6P09630 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.95□□□□□ -1.46
HOXC6P09630 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.94□□□□□ -1.46
HOXC6P09630 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC6P09630 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC6P09630 AC132825.1-201ENST00000463573 2247 ntBASIC5.94□□□□□ -1.46
HOXC6P09630 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HOXC6P09630 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC6P09630 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC6P09630 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXC6P09630 SNORD56.6-201ENST00000384569 71 ntBASIC5.94□□□□□ -1.46
HOXC6P09630 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.94□□□□□ -1.46
HOXC6P09630 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC6P09630 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC6P09630 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC6P09630 FTH1P2-201ENST00000466086 412 ntBASIC5.94□□□□□ -1.46
HOXC6P09630 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.94□□□□□ -1.46
HOXC6P09630 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.94□□□□□ -1.46
HOXC6P09630 AC091912.1-201ENST00000511351 248 ntBASIC5.94□□□□□ -1.46
HOXC6P09630 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC6P09630 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC6P09630 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC6P09630 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
HOXC6P09630 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC6P09630 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXC6P09630 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXC6P09630 BGLT3-201ENST00000564523 994 ntBASIC5.94□□□□□ -1.46
HOXC6P09630 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.94□□□□□ -1.46
HOXC6P09630 AL139124.1-201ENST00000609123 421 ntBASIC5.94□□□□□ -1.46
HOXC6P09630 MTCO1P1-201ENST00000624263 1081 ntBASIC5.94□□□□□ -1.46
HOXC6P09630 AP003400.3-201ENST00000624904 346 ntBASIC5.94□□□□□ -1.46
HOXC6P09630 AC009452.1-201ENST00000640823 606 ntBASIC5.94□□□□□ -1.46
HOXC6P09630 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC6P09630 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
HOXC6P09630 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms