Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC6.89□□□□□ -1.31
THBS1P07996 MTCO2P5-201ENST00000422621 426 ntBASIC6.89□□□□□ -1.31
THBS1P07996 SNX18P3-201ENST00000424993 835 ntBASIC6.89□□□□□ -1.31
THBS1P07996 USP9YP16-201ENST00000430287 407 ntBASIC6.89□□□□□ -1.31
THBS1P07996 HBBP1-201ENST00000433329 439 ntBASIC6.89□□□□□ -1.31
THBS1P07996 AC024082.2-201ENST00000434771 238 ntBASIC6.89□□□□□ -1.31
THBS1P07996 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC6.89□□□□□ -1.31
THBS1P07996 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.89□□□□□ -1.31
THBS1P07996 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC6.89□□□□□ -1.31
THBS1P07996 RPS26P30-201ENST00000443431 335 ntBASIC6.89□□□□□ -1.31
THBS1P07996 LIN28AP2-201ENST00000445283 458 ntBASIC6.89□□□□□ -1.31
THBS1P07996 AC132479.1-201ENST00000449160 144 ntBASIC6.89□□□□□ -1.31
THBS1P07996 USP9YP23-201ENST00000455085 407 ntBASIC6.89□□□□□ -1.31
THBS1P07996 MTND1P12-201ENST00000455231 147 ntBASIC6.89□□□□□ -1.31
THBS1P07996 BX248409.1-201ENST00000455497 255 ntBASIC6.89□□□□□ -1.31
THBS1P07996 Y_RNA.639-201ENST00000458981 102 ntBASIC6.89□□□□□ -1.31
THBS1P07996 SNORD19B-201ENST00000459623 84 ntBASIC6.89□□□□□ -1.31
THBS1P07996 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.89□□□□□ -1.31
THBS1P07996 AC023194.1-201ENST00000493084 308 ntBASIC6.89□□□□□ -1.31
THBS1P07996 AC112204.1-201ENST00000502591 103 ntBASIC6.89□□□□□ -1.31
THBS1P07996 OR7E99P-201ENST00000505750 922 ntBASIC6.89□□□□□ -1.31
THBS1P07996 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.89□□□□□ -1.31
THBS1P07996 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.89□□□□□ -1.31
THBS1P07996 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC6.89□□□□□ -1.31
THBS1P07996 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC6.89□□□□□ -1.31
THBS1P07996 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC6.89□□□□□ -1.31
THBS1P07996 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC6.89□□□□□ -1.31
THBS1P07996 AC243312.1-201ENST00000570582 275 ntBASIC6.89□□□□□ -1.31
THBS1P07996 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.89□□□□□ -1.31
THBS1P07996 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.89□□□□□ -1.31
THBS1P07996 AL589863.1-201ENST00000595383 631 ntBASIC6.89□□□□□ -1.31
THBS1P07996 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.89□□□□□ -1.31
THBS1P07996 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.89□□□□□ -1.31
THBS1P07996 XIAPP1-201ENST00000603162 600 ntBASIC6.89□□□□□ -1.31
THBS1P07996 AC008638.3-201ENST00000603341 463 ntBASIC6.89□□□□□ -1.31
THBS1P07996 U47924.1-201ENST00000606539 434 ntBASIC6.89□□□□□ -1.31
THBS1P07996 DISC2.1-201ENST00000612827 205 ntBASIC6.89□□□□□ -1.31
THBS1P07996 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
THBS1P07996 AC068831.8-201ENST00000620171 435 ntBASIC6.89□□□□□ -1.31
THBS1P07996 AP006248.2-201ENST00000623309 592 ntBASIC6.89□□□□□ -1.31
THBS1P07996 TTK-211ENST00000627129 240 ntTSL 5 BASIC6.89□□□□□ -1.31
THBS1P07996 SNORA43.5-201ENST00000631270 138 ntBASIC6.89□□□□□ -1.31
THBS1P07996 AC233280.20-201ENST00000637412 416 ntBASIC6.89□□□□□ -1.31
THBS1P07996 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
THBS1P07996 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
THBS1P07996 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
THBS1P07996 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
THBS1P07996 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.89□□□□□ -1.31
THBS1P07996 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
THBS1P07996 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
THBS1P07996 DBF4P1-201ENST00000412976 1892 ntBASIC6.89□□□□□ -1.31
THBS1P07996 AL359396.1-201ENST00000623151 2376 ntBASIC6.89□□□□□ -1.31
THBS1P07996 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
THBS1P07996 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
THBS1P07996 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
THBS1P07996 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
THBS1P07996 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
THBS1P07996 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
THBS1P07996 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
THBS1P07996 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
THBS1P07996 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
THBS1P07996 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.88□□□□□ -1.31
THBS1P07996 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC6.88□□□□□ -1.31
THBS1P07996 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
THBS1P07996 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
THBS1P07996 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
THBS1P07996 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
THBS1P07996 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.88□□□□□ -1.31
THBS1P07996 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
THBS1P07996 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.88□□□□□ -1.31
THBS1P07996 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC6.88□□□□□ -1.31
THBS1P07996 AL357556.1-201ENST00000421884 1388 ntBASIC6.88□□□□□ -1.31
THBS1P07996 TUBBP10-201ENST00000427668 1301 ntBASIC6.88□□□□□ -1.31
THBS1P07996 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
THBS1P07996 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
THBS1P07996 SNORD42.2-201ENST00000365570 69 ntBASIC6.88□□□□□ -1.31
THBS1P07996 COQ3-202ENST00000369240 646 ntTSL 5 BASIC6.88□□□□□ -1.31
THBS1P07996 RNU6-1105P-201ENST00000384774 107 ntBASIC6.88□□□□□ -1.31
THBS1P07996 CNN3P1-201ENST00000401596 935 ntBASIC6.88□□□□□ -1.31
THBS1P07996 SNORA11C-201ENST00000408532 129 ntBASIC6.88□□□□□ -1.31
THBS1P07996 SNORA2C-201ENST00000408564 137 ntBASIC6.88□□□□□ -1.31
THBS1P07996 SPA17P1-201ENST00000416656 452 ntBASIC6.88□□□□□ -1.31
THBS1P07996 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.88□□□□□ -1.31
THBS1P07996 ISCA1P6-201ENST00000427740 390 ntBASIC6.88□□□□□ -1.31
THBS1P07996 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC6.88□□□□□ -1.31
THBS1P07996 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC6.88□□□□□ -1.31
THBS1P07996 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.88□□□□□ -1.31
THBS1P07996 RPS29P5-201ENST00000452777 171 ntBASIC6.88□□□□□ -1.31
THBS1P07996 AC008429.2-201ENST00000523057 864 ntBASIC6.88□□□□□ -1.31
THBS1P07996 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC6.88□□□□□ -1.31
THBS1P07996 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.88□□□□□ -1.31
THBS1P07996 AC087241.2-201ENST00000535801 324 ntBASIC6.88□□□□□ -1.31
THBS1P07996 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.88□□□□□ -1.31
THBS1P07996 AC018630.1-201ENST00000541376 925 ntBASIC6.88□□□□□ -1.31
THBS1P07996 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.88□□□□□ -1.31
THBS1P07996 HIGD1AP9-201ENST00000550710 279 ntBASIC6.88□□□□□ -1.31
THBS1P07996 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.88□□□□□ -1.31
THBS1P07996 DNM1P31-201ENST00000564149 696 ntBASIC6.88□□□□□ -1.31
THBS1P07996 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.88□□□□□ -1.31
THBS1P07996 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms